LOCUS BC064983 3004 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens armadillo repeat containing, X-linked 5, mRNA (cDNA
clone MGC:71342 IMAGE:2960871), complete cds.
ACCESSION BC064983
VERSION BC064983.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3004)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3004)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: a Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41054845.
FEATURES Location/Qualifiers
source 1..3004
/db_xref="H-InvDB:HIT000261690"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71342 IMAGE:2960871"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3004
/gene="ARMCX5"
/gene_synonym="FLJ12969"
/gene_synonym="FLJ13382"
/db_xref="GeneID:64860"
/db_xref="HGNC:HGNC:25772"
CDS 927..2603
/gene="ARMCX5"
/gene_synonym="FLJ12969"
/gene_synonym="FLJ13382"
/codon_start=1
/product="armadillo repeat containing, X-linked 5"
/protein_id="AAH64983.1"
/db_xref="GeneID:64860"
/db_xref="HGNC:HGNC:25772"
/translation="MVDSGTEARARGKAEAGLQDGISGPATARVNGKTQAEAVAEAEL
KTESVTQAKAGDGAMTRTHTVTYREAMAVTREVIKVEDTTKTRVMVETKTKPLAERSI
VPQTKSKAMPMSRVSTVTKSEVKVVAVIEANIRSYAKSHDKANTGSRPDRREETSIGM
KSSDEDEENICSWFWTGEEPSVGSWFWPEEETSLQVYKPLPKIQEKPKPTHKPTLTIK
QKVIAWSRARYIVLVPVEGGEQSLPPEGNWTLVETLIETPLGIRPLTKIPPYHGPYYQ
TLAEIKKQIRQREKYGPNPKACHCKSRGFSLEPKEFDKLVALLKLTKDPFIHEIATMI
MGISPAYPFTQDIIHDVGITVMIENLVNNPNVKEHPGALSMVDDSSESSEEPKSGESY
IHQVCKGIISCPLNSPVQLAGLKLLGHLSIKFEDHYVITSYIPDFLTLLNKGSVKTKF
YVLKVFSCLSKNHANTRELISAKVLSSLVAPFNKNESKANILNIIEIFENINFQFKTK
AKLFTKEKFTKSELISIFQEAKQFGQKLQDLAEHSDPEVRDKVIRLILKL"
BASE COUNT 945 a 620 c 681 g 758 t
ORIGIN
1 ctggaaaccc atgtgcattt cagttcagga aagaatggta ggcttggtgg ggggagctcc
61 cgcaaaaggg gaactaatac agaaacactc tggtatttgt ctgcctctct tgttccagcg
121 ccgttttccc tatatccgga attcgtccct gcgcattcca atacctgaag cggccacagg
181 gtacaggaca gggagccctc cgacagaaaa gagtcgcggc gctaaacaaa gcctgatatc
241 actccgcttc cataagccgg atccccataa actacgctct agctcctccc actgccgttg
301 tgggtaacgc ggacgtggaa gaacctcgtc tgcggaggaa aaggtagatg ttaaatggta
361 actacgcgcg aggttctgag gagccctggg aacaggaagg agaaaagaat accaaaagtg
421 acaacagttt gccaatcgca gtctttaatc tgataaagcg gttatctcgt cttgagtccc
481 aggtgccgag tcaatcccca tacacagccg ccgccattgc ctcgagtcct tgtgtctgac
541 tgtctgttcc tgctgctgta tgacacagca cctcgaggca aggaaataag aaaactgcct
601 ctgatccaag cagagaaggt ctgcctgtag atctgctgta gggcttgtca ccattggaag
661 caaggtccta cttcagtggc agatctggtg gccttggagt ggctgaagac caccaccctc
721 cacagggctg ggcccatgca cagccatcct tccctacctt gagtgagctt cctctgcatg
781 ttttctatat cactggcaga gcctgtagtt ggaaagggga cagagtgact actggacttt
841 gtgtgaaaac accaaccggg acaaaacttc agtcaaggct gagacgggtg ggggtatata
901 acttgtcctt acgttaaact tggaacatgg ttgactctgg gacagaagca agggctagag
961 gaaaggctga ggctggcctg caagatggaa tcagtggtcc tgccactgct agagtgaatg
1021 gtaaaaccca ggccgaggca gtggctgagg cagaactgaa aacagaatca gtgacccagg
1081 ccaaagctgg tgatggagca atgaccagga cacatacagt gacctacagg gaggctatgg
1141 ctgtgacaag ggaagtgatc aaggtggaag atacaactaa gactagagtc atggttgaga
1201 ctaagacaaa acccctggca gaacgcagta tagtgccaca aaccaagtca aaggccatgc
1261 ctatgtctag ggtcagtact gtaaccaagt ctgaagtcaa ggttgttgct gtcattgagg
1321 caaatattag gtcctatgcc aagtcacatg ataaggccaa tactgggtcc agacctgaca
1381 gaagggaaga gaccagcatt gggatgaaat ccagtgatga ggatgaagaa aatatatgct
1441 cctggttctg gactggagaa gagcctagtg tagggtcctg gttctggcct gaagaagaga
1501 cctctcttca agtttataag cccctaccta agatccagga aaagcccaag cccacacaca
1561 aacccacact tactataaaa caaaaggtaa tagcatggtc aagggccagg tatattgtcc
1621 tagttccagt tgaaggaggg gagcaatcct tgcctccaga aggaaactgg accctggttg
1681 agaccttgat tgaaactcct ctggggattc gacctttgac caagatccca ccttatcatg
1741 ggccttatta ccagacctta gctgagatca aaaaacagat taggcaaagg gaaaagtatg
1801 ggcctaatcc gaaggcctgc cactgcaaat cacgtggctt tagtttagag cctaaagagt
1861 ttgataaact tgttgccctc cttaagttaa ctaaggatcc tttcattcat gaaatagcta
1921 caatgataat gggcatcagt cctgcttatc catttactca agatataatt catgatgtag
1981 gtattactgt tatgattgaa aacttggtca ataatcccaa tgttaaagaa caccctggag
2041 ctttaagtat ggtggatgac agctctgagt cttccgaaga accaaaatca ggggagtcat
2101 atatacatca agtttgtaaa ggcataatct cttgcccctt gaactcccct gtgcagctgg
2161 ctggactgaa attactaggg cacttgagta taaaatttga agatcactat gtgattacca
2221 gttatattcc agatttcctc accttgttaa acaagggaag tgtcaaaacc aagttttatg
2281 ttttaaaagt gttttcgtgt ttgtctaaaa atcacgccaa tacaagagaa ttgatcagtg
2341 ccaaagtact gtcatcattg gttgcaccct ttaacaagaa tgagtcaaag gccaatattc
2401 ttaatattat tgaaatattt gagaatataa attttcagtt caaaacaaag gcaaagctat
2461 ttaccaagga aaagttcact aaatctgagc ttatttcaat attccaggaa gcaaaacagt
2521 ttggtcagaa actccaagac ttagcagagc acagtgatcc cgaagtgaga gataaagtca
2581 tacgattaat actaaaactc tgaatacccc tctgttctca taaagcctca aacagttttt
2641 tggagttgca atatgaaacc aatgcatatt gtaattataa attcaatact tatgttttcc
2701 atgttgattg agggaggcaa ttttatggat accaattaat cttgagatcc tgaacatgtg
2761 ctgattttta ttgtgctata tagtatataa attgagatat ttttggtatt tctgcaacgt
2821 gacctgataa tgaatctatt catcctgagt aagctatact tctgtgcttt atattgatat
2881 gtgtattctt ttgagatttt atttacatgt tgttaataaa gttgcatgct aaaactggtg
2941 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3001 aaaa
//