LOCUS BC064976 1835 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens recombination signal binding protein for
immunoglobulin kappa J region, mRNA (cDNA clone MGC:70941
IMAGE:6152924), complete cds.
ACCESSION BC064976
VERSION BC064976.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1835)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1835)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: k Column: 22.
FEATURES Location/Qualifiers
source 1..1835
/db_xref="H-InvDB:HIT000261683"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70941 IMAGE:6152924"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1835
/gene="RBPJ"
/gene_synonym="CBF1"
/gene_synonym="csl"
/gene_synonym="IGKJRB"
/gene_synonym="KBF2"
/gene_synonym="RBP-J"
/gene_synonym="RBPJK"
/gene_synonym="SUH"
/db_xref="GeneID:3516"
/db_xref="HGNC:HGNC:5724"
/db_xref="MIM:147183"
CDS 184..1644
/gene="RBPJ"
/gene_synonym="CBF1"
/gene_synonym="csl"
/gene_synonym="IGKJRB"
/gene_synonym="KBF2"
/gene_synonym="RBP-J"
/gene_synonym="RBPJK"
/gene_synonym="SUH"
/codon_start=1
/product="recombination signal binding protein for
immunoglobulin kappa J region"
/protein_id="AAH64976.1"
/db_xref="GeneID:3516"
/db_xref="HGNC:HGNC:5724"
/db_xref="MIM:147183"
/translation="MAWIKRKFGERPPPKRLTREAMRNYLKERGDQTVLILHAKVAQK
SYGNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLN
LEGKNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSL
KNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEG
EEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYL
KDTERMYLCLSQERIIQFQATPCPKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVL
APVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVP
DISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAILRAN
SSQVPPNESNTNSEGSYTNASTNSTSVTSSTATVVS"
BASE COUNT 590 a 363 c 415 g 467 t
ORIGIN
1 gcgcctgttg tgacaggtca ttgaaattat gagactatca ttcaaatgga agcattatag
61 ttcttcggaa ccattatgat ctcaaaacga aaggagaatg atacagatac actggctgag
121 gtgttttgag gtgcatcgaa gtgttccaag ctgtgactta ccttaacatg ttcttgaagt
181 accatggcgt ggattaaaag gaaatttggt gagcggcctc cacctaaacg acttactagg
241 gaagctatgc gaaattattt aaaagagcga ggggatcaaa cagtacttat tcttcatgca
301 aaagttgcac agaagtcata tggaaatgaa aaaaggtttt tttgcccacc tccttgtgta
361 tatcttatgg gcagtggatg gaagaaaaaa aaagaacaaa tggaacgcga tggttgttct
421 gaacaagagt ctcaaccgtg tgcatttatt gggataggaa atagtgacca agaaatgcag
481 cagctaaact tggaaggaaa gaactattgc acagccaaaa cattgtatat atctgactca
541 gacaagcgaa agcacttcat gttgtctgta aagatgttct atggcaacag tgatgacatt
601 ggtgtgttcc tcagcaagcg gataaaagtc atctccaaac cttccaaaaa gaagcagtca
661 ttgaaaaatg ctgacttatg cattgcctca ggaacaaagg tggctctgtt taatcgacta
721 cgatcccaga cagttagtac cagatacttg catgtagaag gaggtaattt tcatgccagt
781 tcacagcagt ggggagcctt ttttattcat ctcttggatg atgatgaatc agaaggagaa
841 gaattcacag tccgagatgg ctacatccat tatggacaaa cagtcaaact tgtgtgctca
901 gttactggca tggcactccc aagattgata attaggaaag ttgataagca gaccgcatta
961 ttggatgcag atgatcctgt gtcacaactc cataaatgtg cattttacct taaggataca
1021 gaaagaatgt atttgtgcct ttctcaagaa agaataattc aatttcaggc cactccatgt
1081 ccaaaagaac caaataaaga gatgataaat gatggcgctt cctggacaat cattagcaca
1141 gataaggcag agtatacatt ttatgaggga atgggccctg tccttgcccc agtcactcct
1201 gtgcctgtgg tagagagcct tcagttgaat ggcggtgggg acgtagcaat gcttgaactt
1261 acaggacaga atttcactcc aaatttacga gtgtggtttg gggatgtaga agctgaaact
1321 atgtacaggt gtggagagag tatgctctgt gtcgtcccag acatttctgc attccgagaa
1381 ggttggagat gggtccggca accagtccag gttccagtaa ctttggtccg aaatgatgga
1441 atcatttatt ccaccagcct tacctttacc tacacaccag aaccagggcc gcggccacat
1501 tgcagtgcag caggagcaat ccttcgagcc aattcaagcc aggtgccccc taacgaatca
1561 aacacaaaca gcgagggaag ttacacaaac gccagcacaa attcaaccag tgtcacatca
1621 tctacagcca cagtggtatc ctaactaccg tctttttgct aggacttaaa ctgacttgag
1681 tgtggcaaaa agttaacaaa aaaggagaaa aaatgaacaa tcgtttgtgg tttcttggga
1741 aaacttttca taccaggtga tactattcaa aaaccccgtt gtctccctgc aagtgctgat
1801 ttgaaatgca gaagccacag taaaaaaaaa aaaaa
//