LOCUS BC064940 2833 bp mRNA linear HUM 07-MAY-2019
DEFINITION Homo sapiens cytokine-like nuclear factor n-pac, mRNA (cDNA clone
MGC:70426 IMAGE:5787345), complete cds.
ACCESSION BC064940
VERSION BC064940.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2833)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2833)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
REFERENCE 3 (bases 1 to 2833)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2019) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On May 7, 2019 this sequence version replaced BC064940.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: a Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308339.
FEATURES Location/Qualifiers
source 1..2833
/db_xref="H-InvDB:HIT000261648"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70426 IMAGE:5787345"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2833
/gene="N-PAC"
/gene_synonym="BM045"
/gene_synonym="HIBDL"
/db_xref="GeneID:84656"
CDS 412..1866
/gene="N-PAC"
/gene_synonym="BM045"
/gene_synonym="HIBDL"
/codon_start=1
/product="N-PAC protein"
/protein_id="AAH64940.1"
/db_xref="GeneID:84656"
/translation="MIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNS
SEERSRPNSGDEKRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRKR
GRPPKDEKDLTIPESSTVKGMMAGPMAAFKWQPTASEPVKDADPHFHHFLLSQTEKPA
VCYQAITKKLKICEEETGSTSIQAADSTAVNGSITPTDKKIGFLGLGLMGSGIVSNLL
KMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPS
GVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILA
AGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVT
GQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNH
PTPMAAAANEVYKRAKALDQSDNDMSAVYRAYIH"
misc_feature 1012..1140
/gene="N-PAC"
/gene_synonym="BM045"
/gene_synonym="HIBDL"
/note="NAD_binding_2; Region: NAD binding domain of
6-phosphogluconate dehydrogenase. The NAD binding domain
of 6-phosphogluconate dehydrogenase adopts a Rossman fold"
/db_xref="CDD:pfam03446"
BASE COUNT 726 a 750 c 790 g 567 t
ORIGIN
1 gtaagatggc ggctgtgagt ctgcggctcg gcgacttggt gtgggggaaa ctcggccgat
61 atcctccttg gccaggaaag attgttaatc caccaaagga cttgaagaaa cctcgcggaa
121 agaaatgctt ctttgtgaaa ttttttggaa cagaagatca atagacccag ccccatttct
181 ctatcacaag ccagcttagc agcctgtggt ggcagtattt caaggagatc gctggcctgg
241 agctgtggag ccagagcttc tggaagaggg aatgttctta gaactccatg gatttaaaaa
301 gaagatttgg ccgggcatgg tgcctcaggc ctgcaatccc agtactttgg gaggccaagt
361 gcctggatca aagtggaaca gctgaagcca tatcatgctc ataaagagga aatgataaaa
421 attaacaagg gtaaacgatt ccagcaagcg gtagatgctg tcgaagagtt cctcaggaga
481 gccaaaggga aagaccagac gtcatcccac aattcttctg atgacaagaa tcgacgtaat
541 tccagtgagg agagaagtag gccaaactca ggtgatgaga agcgcaaact tagcctgtct
601 gaagggaagg tgaagaagaa catgggagaa ggaaagaaga gggtgtcttc aggctcttca
661 gagagaggct ccaaatcccc tctgaaaaga gcccaagagc aaagtccccg gaagcggggt
721 cggcccccaa aggatgagaa ggatctcacc atcccggagt ctagtaccgt gaaggggatg
781 atggccggac cgatggccgc gtttaaatgg cagccaaccg caagcgagcc tgttaaagat
841 gcagatcctc atttccatca tttcctgcta agccaaacag agaagccagc tgtctgttac
901 caggcaatca cgaagaagtt gaaaatatgt gaagaggaaa ctggctccac ctccatccag
961 gcagctgaca gcacagccgt gaatggcagc atcacaccca cagacaaaaa gataggattt
1021 ttgggccttg gtctcatggg aagtggaatc gtctccaact tgctaaaaat gggtcacaca
1081 gtgactgtct ggaaccgcac tgcagagaaa tgtgatttgt tcatccagga gggggcccgt
1141 ctgggaagaa cccccgctga agtcgtctca acctgcgaca tcactttcgc ctgcgtgtcg
1201 gatcccaagg cggccaagga cctggtgctg ggccccagtg gtgtgctgca agggatccgc
1261 cctgggaagt gctacgtgga catgtcaaca gtggacgctg acaccgtcac tgagctggcc
1321 caggtgattg tgtccagggg ggggcgcttt ctggaagccc ccgtctcagg gaatcagcag
1381 ctgtctaatg acgggatgtt ggtgatctta gcggctggag acaggggctt atatgaggac
1441 tgcagcagct gcttccaggc gatggggaag acctccttct tcctaggtga agtgggcaat
1501 gcagccaaga tgatgctgat cgtgaacatg gtccaaggga gcttcatggc cactattgcc
1561 gaggggctga ccctggccca ggtgacaggc cagtcccagc agacactctt ggacatcctc
1621 aatcagggac agttggccag catcttcctg gaccagaagt gccaaaatat cctgcaagga
1681 aactttaagc ctgatttcta cctgaaatac attcagaagg atctccgctt agccattgcg
1741 ctgggtgatg cggtcaacca tccgactccc atggcagctg cagcaaatga ggtgtacaaa
1801 agagccaagg cgctggacca gtccgacaac gatatgtccg ccgtgtaccg agcctacata
1861 cactaagctg tcgacacccc gccctcaccc ctccaatccc ccctctgacc ccctcttcct
1921 cacatggggt cgggggcctg ggagttcatt ctggaccagc ccacctatct ccatttcctt
1981 ttatacagac tttgagactt gccatcagca cagcacacag cagcaccctt cccctgaggc
2041 cggtggggag gggacaagtg tcagcaggat tggcgtgtgg gaaagctctt gagctgggca
2101 ctggcccccc ggacgaggtg gctgtgtgtt cacacacaca cacacacaca cacacacaca
2161 cacacacagg ctctcgcccc aggatagaag ctgcccagaa actgctgcct ggcttttttt
2221 tcttccgagc ttgtcttatc tcaaacccct tccagtcaag gaactagaat cagcaacgag
2281 agttggaagc cttcccacag cttcccccag agcgaagagg ctgtagtcat gtccccatcc
2341 cccactggat tccctacaag gagaggcctt gggcccagat gagccagtac agactccaga
2401 cagaggggcc cttggggccc tccaacctca ggtgatgagc tgagaaagat gttcacgtct
2461 aagcgtccag tgtgcaccca gcgctccata gacgcctttg tgaactgaaa agagactggc
2521 agagtcccga gaagatgggg ccctggcttt ccagggagtg cagcaagcag ccggcctgca
2581 gacccagcct gaccaacgat gagcatttct taggctcagc tcttgatacg gaaacgagtg
2641 tcttcactcc agccagcatc atggtcttcg gtgcttcccg ggcccggggt ctgtcgggag
2701 ggaagagaac tgggcctgac ctacctgaac tgactggccc tccgaggtgg gtctgggaca
2761 tcctagaggc cctacatttg tccttggata ggggaccggg gggggcttgg aatgttgcaa
2821 aaaaaaaaaa aaa
//