LOCUS BC064694 5855 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens wingless-type MMTV integration site family, member 5A,
mRNA (cDNA clone MGC:71588 IMAGE:30346200), complete cds.
ACCESSION BC064694
VERSION BC064694.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5855)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5855)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: i Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40806204.
FEATURES Location/Qualifiers
source 1..5855
/db_xref="H-InvDB:HIT000261573"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71588 IMAGE:30346200"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..5855
/gene="WNT5A"
/gene_synonym="hWNT5A"
/db_xref="GeneID:7474"
/db_xref="HGNC:HGNC:12784"
/db_xref="MIM:164975"
CDS 319..1461
/gene="WNT5A"
/gene_synonym="hWNT5A"
/codon_start=1
/product="wingless-type MMTV integration site family,
member 5A"
/protein_id="AAH64694.1"
/db_xref="GeneID:7474"
/db_xref="HGNC:HGNC:12784"
/db_xref="MIM:164975"
/translation="MKKSIGILSPGVALGMAGSAMSSKFFLVALAIFFSFAQVVIEAN
SWWSLGMNNPVQMSEVYIIGAQPLCSQLAGLSQGQKKLCHLYQDHMQYIGEGAKTGIK
ECQYQFRHRRWNCSTVDNTSVFGRVMQIGSRETAFTYAVSAAGVVNAMSRACREGELS
TCGCSRAARPKDLPRDWLWGGCGDNIDYGYRFAKEFVDARERERIHAKGSYESARILM
NLHNNEAGRRTVYNLADVACKCHGVSGSCSLKTCWLQLADFRKVGDALKEKYDSAAAM
RLNSRGKLVQVNSRFNSPTTQDLVYIDPSPDYCVRNESTGSLGTQGRLCNKTSEGMDG
CELMCCGRGYDQFKTVQTERCHCKFHWCCYVKCKKCTEIVDQFVCK"
BASE COUNT 1666 a 1204 c 1229 g 1756 t
ORIGIN
1 agttgcctgc gcgccctcgc cggaccggcg gctccctagt tgcgccccga ccaggccctg
61 cccttgctgc cggctcgcgc gcgtccgcgc cccctccatt cctgggcgca tcccagctct
121 gccccaactc gggagtccag gcccgggcgc cagtgcccgc ttcagctccg gttcactgcg
181 cccgccggac gcgcgccgga ggactccgca gccctgctcc tgaccgtccc cccaggctta
241 acccggtcgc tccgctcgga ttcctcggct gcgctcgctc gggtggcgac ttcctccccg
301 cgccccctcc ccctcgccat gaagaagtcc attggaatat taagcccagg agttgctttg
361 gggatggctg gaagtgcaat gtcttccaag ttcttcctag tggctttggc catatttttc
421 tccttcgccc aggttgtaat tgaagccaat tcttggtggt cgctaggtat gaataaccct
481 gttcagatgt cagaagtata tattatagga gcacagcctc tctgcagcca actggcagga
541 ctttctcaag gacagaagaa actgtgccac ttgtatcagg accacatgca gtacatcgga
601 gaaggcgcga agacaggcat caaagaatgc cagtatcaat tccgacatcg aaggtggaac
661 tgcagcactg tggataacac ctctgttttt ggcagggtga tgcagatagg cagccgcgag
721 acggccttca catacgcggt gagcgcagca ggggtggtga acgccatgag ccgggcgtgc
781 cgcgagggcg agctgtccac ctgcggctgc agccgcgccg cgcgccccaa ggacctgccg
841 cgggactggc tctggggcgg ctgcggcgac aacatcgact atggctaccg ctttgccaag
901 gagttcgtgg acgcccgcga gcgggagcgc atccacgcca agggctccta cgagagtgct
961 cgcatcctca tgaacctgca caacaacgag gccggccgca ggacggtgta caacctggct
1021 gatgtggcct gcaagtgcca tggggtgtcc ggctcatgta gcctgaagac atgctggctg
1081 cagctggcag acttccgcaa ggtgggtgat gccctgaagg agaagtacga cagcgcggcg
1141 gccatgcggc tcaacagccg gggcaagttg gtacaggtca acagccgctt caactcgccc
1201 accacacaag acctggtcta catcgacccc agccctgact actgcgtgcg caatgagagc
1261 accggctcgc tgggcacgca gggccgcctg tgcaacaaga cgtcggaggg catggatggc
1321 tgcgagctca tgtgctgcgg ccgtggctac gaccagttca agaccgtgca gacggagcgc
1381 tgccactgca agttccactg gtgctgctac gtcaagtgca agaagtgcac ggagatcgtg
1441 gaccagtttg tgtgcaagta gtgggtgcca cccagcactc agccccgctc ccaggacccg
1501 cttatttata gaaagtacag tgattctggt ttttggtttt tagaaatatt ttttattttt
1561 ccccaagaat tgcaaccgga accatttttt ttcctgttac catctaagaa ctctgtggtt
1621 tattattaat attataatta ttatttggca ataatggggg tgggaaccaa gaaaaatatt
1681 tattttgtgg atctttgaaa aggtaataca agacttcttt tgatagtata gaatgaaggg
1741 gaaataacac ataccctaac ttagctgtgt ggacatggta cacatccaga aggtaaagaa
1801 atacattttc tttttctcaa atatgccatc atatgggatg ggtaggttcc agttgaaaga
1861 gggtggtaga aatctattca caattcagct tctatgacca aaatgagttg taaattctct
1921 ggtgcaagat aaaaggtctt gggaaaacaa aacaaaacaa aacaaacctc ccttccccag
1981 cagggctgct agcttgcttt ctgcattttc aaaatgataa tttacaatgg aaggacaaga
2041 atgtcatatt ctcaaggaaa aaaggtatat cacatgtctc attctcctca aatattccat
2101 ttgcagacag accgtcatat tctaatagct catgaaattt gggcagcagg gaggaaagtc
2161 cccagaaatt aaaaaattta aaactcttat gtcaagatgt tgatttgaag ctgttataag
2221 aattaggatt ccagattgta aaaagatccc caaatgattc tggacactag attttttttg
2281 tttggggagg ttggcttgaa cataaatgaa aatatcctgt tattttctta gggatacttg
2341 gttagtaaat tataatagta aaaataatac atgaatccca ttcacaggtt ctcagcccaa
2401 gcaacaaggt aattgcgtgc cattcagcac tgcaccagag cagacaacct atttgaggaa
2461 aaacagtgaa atccaccttc ctcttcacac tgagccctct ctgattcctc cgtgttgtga
2521 tgtgatgctg gccacgtttc caaacggcag ctccactggg tcccctttgg ttgtaggaca
2581 ggaaatgaaa cattaggagc tctgcttgga aaacagttca ctacttaggg atttttgttt
2641 cctaaaactt ttattttgag gagcagtagt tttctatgtt ttaatgacag aacttggcta
2701 atggaattca cagaggtgtt gcagcgtatc actgttatga tcctgtgttt agattatcca
2761 ctcatgcttc tcctattgta ctgcaggtgt accttaaaac tgttcccagt gtacttgaac
2821 agttgcattt ataagggggg aaatgtggtt taatggtgcc tgatatctca aagtcttttg
2881 tacataacat atatatatat atacatatat ataaatataa atataaatat atctcattgc
2941 agccagtgat ttagatttac agtttactct ggggttattt ctctgtctag agcattgttg
3001 tccttcactg cagtccagtt gggattatcc caaaagtttt ttgagtcttg agcttgggct
3061 gtggccctgc tgtgatcata ccttgagcac aacgaagcaa ccttgtttct gaggaagctt
3121 gagttctgac tcactgaaat gcgtgttggg ttgaagatat cttttttctt ttctgcctca
3181 cccctttgtc tccaacctcc atttctgttc actttgtgga gagggcatta cttgttcgtt
3241 atagacatgg acgttaagag atattcaaaa ctcagaagca tcagcaatgt ttctcttttc
3301 ttagttcatt ctgcagaatg gaaacccatg cctattagaa atgacagtac ttattaattg
3361 agtccctaag gaatattcag cccactacat agatagcttt tttttttttt tttttttaat
3421 aaggacacct ctttccaaac agtgccatca aatatgttct tatctcagac ttacgttgtt
3481 ttaaaagttt ggaaagatac acatctttca tacccccctt aggcaggttg gctttcatat
3541 cacctcagcc aactgtggct cttaatttat tgcataatga tattcacatc ccctcagttg
3601 cagtgaattg tgagcaaaag atcttgaaag caaaaagcac taattagttt aaaatgtcac
3661 ttttttggtt tttattatac aaaaaccatg aagtactttt tttatttgct aaatcagatt
3721 gttccttttt agtgactcat gtttatgaag agagttgagt ttaacaatcc tagcttttaa
3781 aagaaactat ttaatgtaaa atattctaca tgtcattcag atattatgta tatcttctag
3841 cctttattct gtacttttaa tgtacatatt tctgtcttgc gtgatttgta tatttcactg
3901 gtttaaaaaa caaacatcga aaggcttatg ccaaatggaa gatagaatat aaaataaaac
3961 gttacttgta tattggtaag tggtttcaat tgtccttcag ataattcatg tggagatttt
4021 tggagaaacc atgacggata gtttaggatg actacatgtc aaagtaataa aagagtggtg
4081 aattttacca aaaccaagct atttggaagc ttcaaaaggt ttctatatgt aatggaacaa
4141 aaggggaatt ctcttttcct atatatgttc cttacaaaaa aaaaaaaaaa agaaatcaag
4201 cagatggctt aaagctggtt ataggattgc tcacattctt ttagcattat gcatgtaact
4261 taattgtttt agagcgtgtt gctgttgtaa catcccagag aagaatgaaa aggcacatgc
4321 ttttatccgt gaccagattt ttagtccaaa aaaatgtatt tttttgtgtg tttaccactg
4381 caactattgc acctctctat ttgaatttgc tgtggaccat gtgtggtgtc tctatgccct
4441 ttgaaagcag tttttataaa aagaaagccc gggtctgcag agaatgaaaa ctggttggaa
4501 actaaaggtt cattgtgtta agtgcaatta atacaagtta ttgtgctttt caaaaatgta
4561 cacggaaatc tggacagtgc tgcacagatt gatacattag cctttgcttt ttctctttcc
4621 ggataacctt gtaacatatt gaaacctttt aaggatgcca agaatgcatt attccacaaa
4681 aaaacagcag accaacatat agagtgttta aaatagcatt tctgggcaaa ttcaaactct
4741 tgtggttcta ggactcacat ctgtttcagt ttttcctcag ttgtatattg accagtgttc
4801 tttattgcaa aaacatatac ccgatttagc agtgtcagcg tattttttct tctcatcctg
4861 gagcgtattc aagatcttcc caatacaaga aaattaataa aaaatttata tataggcagc
4921 agcaaaagag ccatgttcaa aatagtcatt atgggctcaa atagaaagaa gacttttaag
4981 ttttaatcca gtttatctgt tgagttctgt gagctactga cctcctgaga ctggcactgt
5041 gtaagtttta gttgcctacc ctagctcttt tctcgtacaa ttttgccaat accaagtttc
5101 aatttgtttt tacaaaacat tattcaagcc actagaatta tcaaatatga cgctatagca
5161 gagtaaatac tctgattaag agaccggtac tagctaactc caagagatcg ttagcagcat
5221 cagtccacaa acacttagtg gcccacaata tatagagaga tagaaaaggt agttataact
5281 tgaagcatgt atttaatgca aataggcacg aaggcacagg tctaaaatac tacattgtca
5341 ctgtaagcta tacttttaaa atatttattt tttttaaagt attttctagt cttttctctc
5401 tctgtggaat ggtgaaagag agatgccgtg ttttgaaagt aagatgatga aatgaatttt
5461 taattcaaga aacattcaga aacataggaa ttaaaactta gagaaatgat ctaatttccc
5521 tgttcacaca aactttacac tttaatctga tgattggata ttttatttta gtgaaacatc
5581 atcttgttag ctaactttaa aaaatggatg tagaatgatt aaaggttggt atgatttttt
5641 tttaatgtat cagtttgaac ctagaatatt gaattaaaat gctgtctcag tattttaaaa
5701 gcaaaaaagg aatggaggaa aattgcatct tagaccattt ttatatgcag tgtacaattt
5761 gctgggctag aaatgagata aagattattt atttttgttc atgtcttgta cttttctatt
5821 aaaatcattt tatgaaatcc aaaaaaaaaa aaaaa
//