LOCUS BC064622 945 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens heat shock transcription factor 2, mRNA (cDNA clone
IMAGE:5732207), complete cds.
ACCESSION BC064622
VERSION BC064622.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 945)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 945)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: h Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6806888
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..945
/db_xref="H-InvDB:HIT000261541"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5732207"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_124"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..945
/gene="HSF2"
/db_xref="GeneID:3298"
/db_xref="MIM:140581"
CDS 45..737
/gene="HSF2"
/codon_start=1
/product="HSF2 protein"
/protein_id="AAH64622.1"
/db_xref="GeneID:3298"
/db_xref="MIM:140581"
/translation="MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRF
AKEILPKYFKHNNMASFVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDD
LLENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKE
VSELRAKHAQQQQVIRKIVQFIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVK
EPTDNHHHKVIF"
BASE COUNT 345 a 156 c 182 g 262 t
ORIGIN
1 ccgcgttcgg gtgtagaatt tggaatccct gcgccgcgtt aacaatgaag cagagttcga
61 acgtgccggc tttcctcagc aagctgtgga cgcttgtgga ggaaacccac actaacgagt
121 tcatcacctg gagccagaat ggccaaagtt ttctggtctt ggatgagcaa cgatttgcaa
181 aagaaattct tcccaaatat ttcaagcaca ataatatggc aagctttgtg aggcaactga
241 atatgtatgg tttccgtaaa gtagtacata tcgactctgg aattgtaaag caagaaagag
301 atggtcctgt agaatttcag catccttact tcaaacaagg acaggatgac ttgttggaga
361 acattaaaag gaaggtttca tcttcaaaac cagaagaaaa taaaattcgt caggaagatt
421 taacaaaaat tataagtagt gctcagaagg ttcagataaa acaggaaact attgagtcca
481 ggctttctga attaaaaagt gagaatgagt ccctttggaa ggaggtgtca gaattacgag
541 caaagcatgc acaacagcaa caagttattc gaaagattgt ccagtttatt gttacattgg
601 ttcaaaataa ccaacttgtg agtttaaaac gtaaaaggcc tctacttcta aacactaatg
661 gagcccaaaa gaagaacctg tttcagcaca tagtcaaaga accaactgat aatcatcatc
721 ataaagtaat tttttagtta gggtctattt tatatttatt gtctcagact aaattttatt
781 atggcagtgt ttcatgcatt caaagaagtg tggtgaataa caattcaagt gttcatccca
841 cagctttgtt aaattgtgac attttttatt atttgcttta gattattgta agaaataaat
901 catcacaaat ctaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//