LOCUS BC064588 1135 bp mRNA linear HUM 13-JAN-2004
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein M, mRNA (cDNA
clone IMAGE:5740504), partial cds.
ACCESSION BC064588
VERSION BC064588.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1135)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1135)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: j Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1135
/db_xref="H-InvDB:HIT000261507"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5740504"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1135
/gene="HNRPM"
/gene_synonym="HNRNPM"
/gene_synonym="HNRNPM4"
/gene_synonym="HNRPM4"
/gene_synonym="HTGR1"
/gene_synonym="NAGR1"
/db_xref="GeneID:4670"
/db_xref="MIM:160994"
CDS <1..858
/gene="HNRPM"
/gene_synonym="HNRNPM"
/gene_synonym="HNRNPM4"
/gene_synonym="HNRPM4"
/gene_synonym="HTGR1"
/gene_synonym="NAGR1"
/codon_start=1
/product="HNRPM protein"
/protein_id="AAH64588.1"
/db_xref="GeneID:4670"
/db_xref="MIM:160994"
/translation="SRSRTGSGIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAG
MGFGLERMAAPIDRVGQTIERMGSGVERMGPAIERMGLSMERMVPAGMGAGLERMGPV
MDRMATGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIE
RMGLAMGGGGGASFDRAIEMERGNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFD
FTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGRE
IDVRIDRNA"
misc_feature 628..840
/gene="HNRPM"
/gene_synonym="HNRNPM"
/gene_synonym="HNRNPM4"
/gene_synonym="HNRPM4"
/gene_synonym="HTGR1"
/gene_synonym="NAGR1"
/note="RRM; Region: RNA recognition motif"
/db_xref="CDD:smart00360"
BASE COUNT 244 a 259 c 368 g 264 t
ORIGIN
1 tcgcgatcta gaacgggctc cggcattgag cgcatgggcc cgctgggcct cgaccacatg
61 gcctccagca ttgagcgcat gggccagacc atggagcgca ttggctctgg cgtggagcgc
121 atgggtgccg gcatgggctt cggccttgag cgcatggccg ctcccatcga ccgtgtgggc
181 cagaccattg agcgcatggg ctctggcgtg gagcgcatgg gccctgccat cgagcgcatg
241 ggcctgagca tggagcgcat ggtgcccgca ggtatgggag ctggcctgga gcgcatgggc
301 cccgtgatgg atcgcatggc caccggcctg gagcgcatgg gcgccaacaa tctggagcgg
361 atgggcctgg agcgcatggg cgccaacagc ctcgagcgca tgggcctgga gcgcatgggt
421 gccaacagcc tcgagcgcat gggccccgcc atgggcccgg ccctgggcgc tggcattgag
481 cgcatgggcc tggccatggg tggcggtggc ggtgccagct ttgaccgtgc catcgagatg
541 gagcgtggca acttcggagg aagcttcgca ggttcctttg gtggagctgg aggccatgct
601 cctggggtgg ccaggaaggc ctgccagata tttgtgagaa atctgccatt cgatttcaca
661 tggaagatgc taaaggacaa attcaacgag tgcggccacg tgctgtacgc cgacatcaag
721 atggagaatg ggaagtccaa ggggtgtggt gtggttaagt tcgagtcgcc agaggtggcc
781 gagagagcct gccggatgat gaatggcatg aagctgagtg gccgagagat tgacgttcga
841 attgatagaa acgcttaagc agttgccttt tttaaacatc gatacgagac ctctgaattt
901 gtattttttc ttgttaacca ttttaatttg ttggctggat gtataaagat gtttaaaaaa
961 ttcagttgct ttttggggta atttgaatta cttttttaat gactggggtt ccatttgact
1021 gtttgcattg agattgcaat gtgcgcaatt ttttttgtag ttgtggcatc ttgttgacat
1081 cgaatatgac tttgataata aataccggtt cctgaaaaaa aaaaaaaaaa aaaaa
//