LOCUS BC064540 1710 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Fanconi anemia, complementation group A, mRNA (cDNA
clone IMAGE:5725803), complete cds.
ACCESSION BC064540
VERSION BC064540.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1710)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1710)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: g Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66880552
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1710
/db_xref="H-InvDB:HIT000261459"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5725803"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1710
/gene="FANCA"
/gene_synonym="FA"
/gene_synonym="FA-H"
/gene_synonym="FA1"
/gene_synonym="FAA"
/gene_synonym="FAH"
/db_xref="GeneID:2175"
/db_xref="HGNC:HGNC:3582"
/db_xref="MIM:607139"
CDS 43..936
/gene="FANCA"
/gene_synonym="FA"
/gene_synonym="FA-H"
/gene_synonym="FA1"
/gene_synonym="FAA"
/gene_synonym="FAH"
/codon_start=1
/product="Fanconi anemia, complementation group A"
/protein_id="AAH64540.1"
/db_xref="GeneID:2175"
/db_xref="HGNC:HGNC:3582"
/db_xref="MIM:607139"
/translation="MSDSWVPNSASGQDPGGRRRAWAELLAGRVKREKYNPERAQKLK
ESAVRLLRSHQDLNALLLEVEGPLCKKLSLSKVIDCDSSEAYANHSSSFIGSALQDQA
SRLGVPVGILSAGMVASSVGQICTAPAETSHPVLLTVEQRKKLSSLLEFAQYLLAHSM
FSRLSFCQELWKIQSSLLLEAVWHLHVQGIVSLQELLESHPDMHAVGSWLFRNLCCLC
EQMEASCQHADVARAMLSDFVQMFVLRGFQKNSDLRRTVEPEKMPQVAVDVLQRMLIF
ALDALAAGVQEESSTHKIVRC"
BASE COUNT 406 a 414 c 465 g 425 t
ORIGIN
1 cgggcgcagg gagccgccgc cggggctgta ggcgccaagg ccatgtccga ctcgtgggtc
61 ccgaactccg cctcgggcca ggacccaggg ggccgccgga gggcctgggc cgagctgctg
121 gcgggaaggg tcaagaggga aaaatataat cctgaacggg cacagaaatt aaaggaatca
181 gctgtgcgcc tcctgcgaag ccatcaggac ctgaatgccc ttttgcttga ggtagaaggt
241 ccactgtgta aaaaattgtc tctcagcaaa gtgattgact gtgacagttc tgaggcctat
301 gctaatcatt ctagttcatt tataggctct gctttgcagg atcaagcctc aaggctgggg
361 gttcccgtgg gtattctctc agccgggatg gttgcctcta gcgtgggaca gatctgcacg
421 gctccagcgg agaccagtca ccctgtgctg ctgactgtgg agcagagaaa gaagctgtct
481 tccctgttag agtttgctca gtatttattg gcacacagta tgttctcccg tctttccttc
541 tgtcaagaat tatggaaaat acagagttct ttgttgcttg aagcggtgtg gcatcttcac
601 gtacaaggca ttgtgagcct gcaagagctg ctggaaagcc atcccgacat gcatgctgtg
661 ggatcgtggc tcttcaggaa tctgtgctgc ctttgtgaac agatggaagc atcctgccag
721 catgctgacg tcgccagggc catgctttct gattttgttc aaatgtttgt tttgagggga
781 tttcagaaaa actcagatct gagaagaact gtggagcctg aaaaaatgcc gcaggtcgcg
841 gttgatgtac tgcagagaat gctgattttt gcacttgacg ctttggctgc tggagtacag
901 gaggagtcct ccactcacaa gatcgtgagg tgctgagctt cagcagcccg ctcctgagca
961 cacttcctct gccagttacg ataacgtgcg tgaggaggag gcgaccatgg gaaagcccgg
1021 ggaacgctct ggtcagcctt ttcctgtgag gatgaggtcg gaaggtgcgc ccactgcagt
1081 atcctgttcc gcctctggaa gtcctgcacc aatgtttgtc ccactcactg tgacctcctc
1141 ctgtgtggag tctccccttg ctcctccttc cctgggtgtg gttcaggctc tagagctggc
1201 cctgcctctc agccccccac atttctagaa cacactgtag ctgtgcctct acagactccc
1261 gctgcctggc ctccacagat cctgctcaga ttcaccagta ggcaaagctt ggccctattt
1321 gctttttctc tccatggctc tgtggagatg tgcggagacc cttacaggtc gggaggcgga
1381 agctgaggag tgggggctgg gtggaaggtg gacatcgggg tttggtggaa atggggctct
1441 ggggtttgct tccctctagt gtgggcaggg gaccttgaag tgaagtcttg agaaaccagt
1501 agaatttgcc actgtttcca ggccttgtca accttttcat tctttatttt gctcctcatt
1561 tcccatccct cacagtaact gtttaactgc tcaattaaat gtgttgtacc gttcggtact
1621 tttactgaaa cagtgaataa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//