LOCUS BC064346 1379 bp mRNA linear HUM 02-JAN-2004
DEFINITION Homo sapiens GCN1 general control of amino-acid synthesis 1-like 1
(yeast), mRNA (cDNA clone IMAGE:4442636), partial cds.
ACCESSION BC064346
VERSION BC064346.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1379)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1379)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: i Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1379
/db_xref="H-InvDB:HIT000261309"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4442636"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1379
/gene="GCN1L1"
/gene_synonym="GCN1L"
/gene_synonym="KIAA0219"
/db_xref="GeneID:10985"
/db_xref="MIM:605614"
CDS <1..745
/gene="GCN1L1"
/gene_synonym="GCN1L"
/gene_synonym="KIAA0219"
/codon_start=2
/product="GCN1L1 protein"
/protein_id="AAH64346.1"
/db_xref="GeneID:10985"
/db_xref="MIM:605614"
/translation="KNIVSLLLSMLGHDEDNTRISSAGCLGELCAFLTEEELSAVLQQ
CLLADVSGIDWMVRHGRSLALSVAVNVAPGRLCAGRYSSDVQEMILSSATADRIPIAV
SGVRGMGFLMRHHIETGGGQLPAKLSSLFVKCLQNPSSDIRLVAEKMIWWANKDPLPP
LDPQAIKPILKALLDNTKDKNTVVRAYSDQAIVNLLKMRQGEEVFQSLSKILDVASLE
VLNEVNRRSLKKLASQADSTEQVDDTILT"
BASE COUNT 363 a 331 c 372 g 313 t
ORIGIN
1 gaaaaacatc gtctcactcc tgctgagcat gctgggacac gatgaggaca acactcgcat
61 ctcctcagcc gggtgcctag gggaactgtg tgcctttttg actgaagagg agcttagtgc
121 cgttctacag cagtgcttgc tggcggacgt gtccggcatt gactggatgg ttcggcacgg
181 gcggagcctg gcactttccg tggctgtgaa tgtggctcct ggcagacttt gtgccggcag
241 atatagcagt gatgttcagg aaatgatcct gagcagtgcc acggcggaca ggatccccat
301 tgcggtgagc ggggtccggg gcatgggctt tctcatgaga caccacatcg agacaggcgg
361 agggcagttg ccggccaaac tttccagcct gttcgttaag tgtctgcaga acccatccag
421 cgacatcagg ctggtggctg agaagatgat ctggtgggca aataaggacc cactgcctcc
481 cctggacccc caggccatca agcccatcct gaaggctctt cttgacaaca ccaaggataa
541 gaacaccgtg gtcagggcct acagcgacca ggcaattgtc aacctcctca agatgcggca
601 gggtgaagag gtgtttcagt ccctctccaa gatcctggat gtggccagtt tggaggtgct
661 gaacgaggtt aaccgaaggt ccctgaagaa gctggccagc caggccgact ccacggagca
721 ggtggacgac accatcctga catgagaggc ctgggccagc agcagcattg ccgctccaca
781 tctttgctca atgttttcat ttttgaaaat acatttgttc caatggggag cttggaagat
841 ggcgttccca gaaagtattt taatatcaat agaccacagc caaagcctta aatcaaaccc
901 acacacaact gaaaattgcc tcctccatct ctcacctttt cctgtggaga agagaaggaa
961 aagcacacgc atgcgcctca gcaaatggca gcccaggagc tgtttgtcca gtttagcatg
1021 gctaggtctg gaactataat agcagggtca gactgtgggt tcctcttctc ctgtgcttga
1081 gctctggttt gagagctggc gctaccaacc tttttcctat atcccgagtg gggcacagac
1141 ggtggatctc tgcccagtgt ggtgtgtctg gcttggcttt tcaatattgt gaggtctgaa
1201 tggatctgac ccctgtcaga tgaaaatgat tcacagctct ggcagttccc aagtctgggg
1261 aggggtatag gtttgaaagg ctgtttgaaa gaggaatgtt taataaaggc tttgatttaa
1321 tcttgaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//