LOCUS BC064138 1762 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens peroxiredoxin 2, mRNA (cDNA clone IMAGE:6176908).
ACCESSION BC064138
VERSION BC064138.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1762)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1762)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: a Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33188453
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1762
/db_xref="H-InvDB:HIT000261280"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6176908"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 404 a 504 c 470 g 384 t
ORIGIN
1 cgcgggtcca cgcgtgtgat cgtccgtgcg tctagccttt gcccacgcag ctttcagtca
61 tggcctccgg taacgcgcgc atcggaaagc cagcccctga cttcaaggcc acagcggtgg
121 ttgatggcgc cttcaaagag gtgaagctgt cggactacaa agggaagtac gtggtcctct
181 ttttctaccc tctggacttc acttttgtgt gccccaccga gatcatcgcg ttcagcaacc
241 gtgcagagga cttccgcaag ctgggctgtg aagtgctggg cgtctcggtg gactctcagt
301 tcacccacct ggcttggtat gagcaggggc caaagaggga ggttgcagct aagctcacac
361 cctcaggtcc tagcagtgtg gcttcgtggc cattgctcaa cctctggaac ctgcgtttcc
421 ccatcgtgaa aataatggaa acattgccgc ccaagtcttt aaggatgatg acagtaatta
481 gcatttgaca actagttgcc tggtatatag agttgcagat gcaactcaga tgcaactcta
541 tctactctat gtacttagtt cccaggaggg aggctgtgct gccctatttc atgaagatgg
601 aaactccagt tcaccgaagt gaagggctgt accccatgac acagctagag gaggatgggg
661 actcttaaca caggctctct gctgggtgat gctgcaagtt acaagtacat gtgaagccac
721 ttagctggag ctgtgcctct caaactcagt cttcccagcc atggggatac agtccttgca
781 cccaacccag ggtggggtgg gtgaggctcc cagcggccta ctctaaagcc ccttatctcc
841 ggcctccagt gcttatcaca ttgggcccac agggtgagga ccctgctgtg ccaggcatcc
901 tgaggcccca actctgtctc ccctactccc aggatcaaca ccccccggaa agagggaggc
961 ttgggccccc tgaacatccc cctgcttgct gacgtgacca gacgcttgtc tgaggattac
1021 ggcgtgctga aaacagatga gggcattgcc tacaggtact gtgggaccct cagcccggct
1081 cagggagcgc cctgcccccc attcctgtga tgctgggacc actcctgtac aatgtcttct
1141 ctgcccccag ccctgtggct agcagcgggt ggttggtagt cccttccttg tctctggcag
1201 tgggagctat cagctcctca ctgggaaccc tgatgtcttc aggggcctct ttatcatcga
1261 tggcaagggt gtccttcgcc agatcactgt taatgatttg cctgtgggac gctccgtgga
1321 tgaggctctg cggctggtcc aggccttcca gtacacagac gagcatgggg aagtttgtcc
1381 cgctggctgg aagcctggca gtgacacgat taagcccaac gtggatgaca gcaaggaata
1441 tttctccaaa cacaattagg ctggctaacg gatagtgagc ttgtgcccct gcctaggtgc
1501 ctgtgctggg tgtccacctg tgcccccacc tgggtgccct atgctgaccc aggaaaggcc
1561 agacctgccc ctccaaactc cacagtatgg gaccctggag ggctaggcca aggccttctc
1621 atgcctccac ctagaagctg aatagtgacg ccctccccca agcccaccca gccgcacaca
1681 ggcctagagg taaccaataa agtattaggg aaaggtgaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aa
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