LOCUS BC063848 4214 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens multimerin 1, mRNA (cDNA clone MGC:75051
IMAGE:6180674), complete cds.
ACCESSION BC063848
VERSION BC063848.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4214)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4214)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: b Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45269140.
FEATURES Location/Qualifiers
source 1..4214
/db_xref="H-InvDB:HIT000261224"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75051 IMAGE:6180674"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4214
/gene="MMRN1"
/gene_synonym="ECM"
/gene_synonym="EMILIN4"
/gene_synonym="GPIa*"
/db_xref="GeneID:22915"
/db_xref="HGNC:HGNC:7178"
/db_xref="MIM:601456"
CDS 72..3758
/gene="MMRN1"
/gene_synonym="ECM"
/gene_synonym="EMILIN4"
/gene_synonym="GPIa*"
/codon_start=1
/product="multimerin 1"
/protein_id="AAH63848.1"
/db_xref="GeneID:22915"
/db_xref="HGNC:HGNC:7178"
/db_xref="MIM:601456"
/translation="MKGARLFVLLSSLWSGGIGLNNSKHSWTIPEDGNSQKTMPSASV
PPNKIQSLQILPTTRVMSAEIATTPEARTSEDSLLKSTLPPSETSAPAEGVRNQTLTS
TEKAEGVVKLQNLTLPTNASIKFNPGAESVVLSNSTLKFLQSFARKSNEQATSLNTVG
GTGGIGGVGGTGGVGNRAPRETYLSRGDSSSSQRTDYQKSNFETTRGKNWCAYVHTRL
SPTVILDNQVTYVPGGKGPCGWTGGSCPQRSQKISNPVYRMQHKIVTSLDWRCCPGYS
GPKCQLRAQEQQSLIHTNQAESHTAVGRGVAEQQQQQGCGDPEVMQKMTDQVNYQAMK
LTLLQKKIDNISLTVNDVRNTYSSLEGKVSEDKSREFQSLLKGLKSKSINVLIRDIVR
EQFKIFQNDMQETVAQLFKTVSSLSEDLESTRQIIQKVNESVVSIAAQQKFVLVQENR
PTLTDIVELRNHIVNVRQEMTLTCEKPIKELEVKQTHLEGALEQEHSRSILYYESLNK
TLSKLKEVHEQLLSTEQVSDQKNAPAAESVSNNVTEYMSTLHENIKKQSLMMLQMFED
LHIQESKINNLTVSLEMEKESLRGECEDMLSKCRNDFKFQLKDTEENLHVLNQTLAEV
LFPMDNKMDKMSEQLNDLTYDMEILQPLLEQGASLRQTMTYEQPKEAIVIRKKIENLT
SAVNSLNFIIKELTKRHNLLRNEVQGRDDALERRINEYALEMEDGLNKTMTIINNAID
FIQDNYALKETLSTIKDNSEIHHKCTSDMETILTFIPQFHRLNDSIQTLVNDNQRYNF
VLQVAKTLAGIPRDEKLNQSNFQKMYQMFNETTSQVRKYQQNMSHLEEKLLLTTKISK
NFETRLQDIESKVTQTLIPYYISVKKGSVVTNERDQALQLQVLNSRFKALEAKSIHLS
INFFSLNKTLHEVLTMCHNASTSVSELNATIPKWIKHSLPDIQLLQKGLREFVEPIIQ
IKTQAALSNLTCCIDRSLPGSLANVVKSQKQVKSLPKKINALKKPTVNLTTVLIGRTQ
RNTDNIIYPEEYSSCSRHPCQNGGTCINGRTSFTCACRHPFTGDNCTIKLVEENALAP
DFSKGSYRYAPMVAFFASHTYGMTIPGPILFNNLDVNYGASYTPRTGKFRIPYLGVYV
FKYTIESFSAHISGFLVVDGIDKLAFESENINSEIHCDRVLTGDALLELNYGQEVWLR
LAKGTIPAKFPPVTTFSGYLLYRT"
BASE COUNT 1453 a 788 c 809 g 1164 t
ORIGIN
1 cagctatcaa aaaggccata aggattttgt ccccaaattt cacatgagct accttgcttc
61 aaactactga gatgaagggg gcaagattat ttgtccttct ttctagttta tggagtgggg
121 gcattgggct taacaacagt aagcattctt ggactatacc tgaggatggg aactctcaga
181 agactatgcc ttctgcttca gttcctccaa ataaaataca aagtttgcaa atactgccaa
241 ccactcgggt catgtcggcg gagatagcta caactccaga ggcaagaact tctgaagaca
301 gtcttcttaa atcaacactg cctccctcag aaacaagtgc acctgctgag ggtgtgagaa
361 atcaaactct cacatccaca gagaaagcag aaggagtggt caagttacag aatcttaccc
421 tcccaaccaa cgctagcatc aagttcaatc ctggagcaga atcagtggtc ctttccaatt
481 ctacactgaa atttcttcag agctttgcca gaaagtcaaa tgaacaagca acttctctaa
541 acacagttgg aggcactgga ggcattggag gcgttggagg cactggaggc gtgggaaatc
601 gagccccacg ggaaacatac ctcagccggg gtgacagcag ttccagccaa agaactgact
661 accaaaaatc aaatttcgaa acaactagag gaaagaattg gtgtgcttat gtacatacca
721 ggttatctcc cacagtgata ttggacaacc aggtcactta tgtcccaggt gggaaaggac
781 cttgtggctg gaccggtgga tcctgtcctc agagatctca gaagatatcc aatcctgtct
841 ataggatgca acataaaatt gtcacctcat tggattggag gtgctgtcct ggatacagtg
901 ggccgaaatg tcaactaaga gcccaggaac agcaaagttt gatacacacc aaccaggctg
961 aaagtcatac agctgttggc agaggagtag ctgagcagca gcagcagcaa ggctgtggtg
1021 acccagaagt gatgcaaaaa atgactgatc aggtgaacta ccaggcaatg aaactgactc
1081 ttctgcagaa gaagattgac aatatttctt tgactgtgaa tgatgtaagg aacacttact
1141 cctccctaga aggaaaagtc agcgaagata aaagcagaga atttcaatct cttctaaaag
1201 gtctaaaatc caaaagcatt aatgtactga taagagacat agtaagagaa caatttaaaa
1261 tttttcaaaa tgacatgcaa gagactgtag cacagctctt caagactgta tcaagtctat
1321 cagaggacct cgaaagcacc aggcaaataa ttcaaaaagt taatgaatct gtggtttcaa
1381 tagcagccca gcaaaagttt gttttggtgc aagagaatcg gcccactttg actgatatag
1441 tggaactaag gaatcacatt gtgaatgtaa ggcaagaaat gactcttaca tgtgagaagc
1501 ctattaaaga actagaagta aagcagactc atttagaagg tgctctagaa caggaacact
1561 caagaagcat tctgtattat gaatccctca ataaaactct ttctaaattg aaggaagtac
1621 atgagcagct tttatcaact gaacaggtat cagaccagaa gaatgctcca gctgctgagt
1681 cagttagcaa taatgtcact gagtacatgt ctactttaca tgaaaatata aagaagcaga
1741 gtttgatgat gctgcaaatg tttgaagatt tgcacattca agaaagcaag attaacaatc
1801 tcaccgtctc tttggagatg gagaaagagt ctctcagagg tgaatgtgaa gacatgttat
1861 ccaaatgcag aaatgatttt aaatttcaac ttaaggacac agaagagaat ttacatgtgt
1921 taaatcaaac attggctgaa gttctctttc caatggacaa taagatggac aaaatgagtg
1981 agcaactaaa tgatttgact tatgatatgg agatccttca acccttgctt gagcagggag
2041 catcactcag acagacaatg acatatgaac aaccaaagga agcaatagtg ataaggaaaa
2101 agatagaaaa tctgactagt gctgtcaata gtctaaattt tattatcaaa gaacttacaa
2161 aaagacacaa cttacttaga aatgaagtac agggtcgtga tgatgcctta gaaagacgta
2221 tcaatgaata tgccttagaa atggaagatg gcctcaataa gacaatgact attataaata
2281 atgctattga tttcattcaa gataactatg ccctaaaaga gactttaagt actattaagg
2341 ataatagtga gatccatcat aaatgtacct ccgatatgga aactattttg acatttattc
2401 ctcagttcca ccgtctgaat gattctattc agactttggt caatgacaat cagagatata
2461 actttgtttt gcaagtcgcc aagacccttg caggtattcc cagagatgag aaactaaatc
2521 agtccaactt ccaaaagatg tatcaaatgt tcaatgaaac cacttcccaa gtgagaaaat
2581 accagcaaaa tatgagtcat ttggaagaaa aactactctt aactaccaag atttccaaaa
2641 attttgagac tcggttgcaa gacattgagt ctaaagttac ccagacgctc ataccttatt
2701 atatttcagt taaaaaaggc agtgtagtta caaatgagag agatcaggct cttcaactgc
2761 aagtattaaa ttccagattt aaggcgttgg aagcaaaatc tatccatctt tcaattaact
2821 tcttttcgct taacaaaact ctccacgaag ttttaacaat gtgtcacaat gcttctacaa
2881 gtgtgtcaga actgaatgct accatcccta agtggataaa acattccctg ccagatattc
2941 aacttcttca gaaaggtcta agagaatttg tggaaccaat aattcaaata aaaactcaag
3001 ctgccctatc taatttaact tgttgtatag atcgatcgtt gcctggtagt ctggcaaatg
3061 ttgtcaagtc tcagaagcaa gtaaaatcat tgccaaagaa aattaacgca cttaagaaac
3121 caacggtaaa tcttaccaca gtcctgatag gccggactca aagaaacacg gacaacataa
3181 tatatcctga ggagtattca agctgtagtc ggcatccgtg ccaaaatggg ggcacgtgca
3241 taaatggaag aactagcttt acctgtgcct gcagacatcc ttttactggt gacaactgca
3301 ctatcaagct tgtggaagaa aatgctttag ctccagattt ttccaaagga tcttacagat
3361 atgcacccat ggtggcattt tttgcatctc atacgtatgg aatgactata cctggtccta
3421 tcctgtttaa taacttggat gtcaattatg gagcttcata taccccaaga actggaaaat
3481 ttagaattcc gtatcttgga gtatatgttt tcaagtacac catcgagtca tttagtgctc
3541 atatttctgg atttttagtg gttgatggaa tagacaagct tgcatttgag tctgaaaata
3601 ttaacagtga aatacactgt gatagggttt taactgggga tgccttatta gaattaaatt
3661 atgggcagga agtctggtta cgacttgcaa aaggaacaat tccagccaag tttccccctg
3721 ttactacatt tagtggctat ttattatatc gtacataagt tagtatgaaa aacagactat
3781 cacctttatt gagaaacagc cagtgttttc atttatcttt gcttgcacat ctgctctgtt
3841 ttggtttttc tacaggaaat gaaaatcaac ttgttttttt aatatgagta aacttgtatg
3901 tctattttat aaaattattt gaatattgtt taatgtctga atatgaaaga gttcttgatc
3961 ctaaagaaat ttagtggcac agaaaacaaa gtgaatttgt tagcataatt attcctattc
4021 ttatttcttc attttaagtc attgcaatgg aaagtaatat tataaaacgg taattacaac
4081 atattatcag tcacagtttt ctttccaatt aaacacttaa cttttgttat tccctgtata
4141 taaatatata acacacattt tctagattca caaatttaaa taaattactc aaaaaatgaa
4201 aaaaaaaaaa aaaa
//