LOCUS BC063845 2040 bp mRNA linear HUM 20-JUL-2004
DEFINITION Homo sapiens claudin 18, mRNA (cDNA clone IMAGE:6177081), partial
cds.
ACCESSION BC063845
VERSION BC063845.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2040)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2040)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: a Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7705960.
FEATURES Location/Qualifiers
source 1..2040
/db_xref="H-InvDB:HIT000261221"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6177081"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 571 a 484 c 448 g 537 t
ORIGIN
1 ggccaggatc atgtccacca ccacatgcca agtggtggcg ttcctcctgt ccatcctggg
61 gctggccggc tgcatcgcgg ccaccgggat ggacatgtgg agcacccagg acctgtacga
121 caaccccgtc acctccgtgt tccagtacga agggctctgg aggagctgcg tgaggcagag
181 ttcaggcttc accgaatgca ggccctattt caccatcctg ggacttccag ccatgctgca
241 ggcagtgcga gccctgatga tcgtaggcat cgtcctgggt gccattggcc tcctggtatc
301 catctttgcc ctgaaatgca tccgcattgg cagcatggag gactctgcca aagccaacat
361 gacactgacc tccgggatca tgttcattgt ctcaggtaca catttggtgc ggctctgttc
421 gtgggctggg tcgctggagg cctcacacta attgggggtg tgatgatgtg catcgcctgc
481 cggggcctgg caccagaaga aaccaactac aaagccgttt cttatcatgc ctcgggccac
541 agtgttgcct acaagcctgg aggcttcaag gccagcactg gctttgggtc caacaccaaa
601 aacaagaaga tatacgatgg aggtgcccgc acagaggacg aggtacaatc ttatccttcc
661 aagcacgact atgtgtaatg ctctaagacc tctcagcacg ggcggaagaa actcccggag
721 agctcaccca aaaaacaagg agatcccatc cagatttctt cttgcttttg actcacagct
781 ggaagttaga aaagcctcga tttcatcttt ggagaggcca aatggtctta gcctcagtct
841 ctgtctctaa atattccacc ataaaacagc tgagttattt atgaattaga ggctatagct
901 cacattttca atcctctatt tcttttttta aatataactt tctactctga tgagagaatg
961 tggttttaat ctctctctca cattttgatg atttagacag actccccctc ttcctcctag
1021 tcaataaacc cattgatgat ctatttccca gcttatcccc aagaaaactt ttgaaaggaa
1081 agagtagacc caaagatgtt attttctgct gtttgaattt tgtctcccca cccccaactt
1141 ggctagtaat aaacacttac tgaagaagaa gcaataagag aaagatattt gtaatctctc
1201 cagcccatga tctcggtttt cttacactgt gatcttaaaa gttaccaaac caaagtcatt
1261 ttcagtttga ggcaaccaaa actttctact gctgttgaca tcttcttatt acagcaacac
1321 cattctagga gtttcctgag ctctccactg gagtcctctt tctgtcacgg gtcagaaatt
1381 gtccctagat gaatgagaaa attatttttt ttaatttaag tcctaaatat agttaaaata
1441 aataatgttt tagtaaaatg atacactatc tctgtgaaat agcctcaccc ctacatgtgg
1501 atagaaggaa atgaaaaaat aattgctttg acattgtcta tatggtactt tgtaaagtca
1561 tgcttaagta caaattgcat gaaaagctca ctgatcctaa ttctttccct ttgaggtctc
1621 tatggctctg attgtacatg atagtaagtg taagccatgt aaaaagtaaa taatgtctgg
1681 gcacagtggc tcacgcctgt aatcctagca ctttcggagg ctgaggagga aggatcgctt
1741 gagcccagaa gttcgagact agcctgggca acatggagaa gccctgtctc tacaaaatac
1801 agagagaaaa aatcagccgg tcatggtggc atacacctgt agtcccagca ttccgggagg
1861 ctgaggtggg aggatcgctt gagcccaggg aggttggggc tgcagtgagc catgatcaca
1921 ccactgcact ccagccaggt gacatagcga gatcctgtct aaaaaaataa aaaataaata
1981 atggaacaca gcaagtccta ggaagtaggt taaaactaat tctttaaaaa aaaaaaaaaa
//