LOCUS BC063841 3545 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquilin 4, mRNA (cDNA clone MGC:74959
IMAGE:6183942), complete cds.
ACCESSION BC063841
VERSION BC063841.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3545)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3545)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: d Column: 18.
FEATURES Location/Qualifiers
source 1..3545
/db_xref="H-InvDB:HIT000261217"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74959 IMAGE:6183942"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3545
/gene="UBQLN4"
/gene_synonym="A1U"
/gene_synonym="UBIN"
/db_xref="GeneID:56893"
/db_xref="HGNC:HGNC:1237"
/db_xref="MIM:605440"
CDS 25..1830
/gene="UBQLN4"
/gene_synonym="A1U"
/gene_synonym="UBIN"
/codon_start=1
/product="ubiquilin 4"
/protein_id="AAH63841.1"
/db_xref="GeneID:56893"
/db_xref="HGNC:HGNC:1237"
/db_xref="MIM:605440"
/translation="MAEPSGAETRPPIRVTVKTPKDKEEIVICDRASVKEFKEEISRR
FKAQQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKAQDPAAATASSPSTP
DPASAPSTTPASPATPAQPSTSGSASSDAGSGSRRSSGGGPSPGAGEGSPSATASILS
GFGGILGLGSLGLGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQDMMSNPDLMRHM
IMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIP
GGYNALRRMYTDIQEPMFSAAREQFGNNPFSSLAGNSDSSSSQPLRTENREPLPNPWS
PSPPTSQAPGSGGEGTGGSGTSQVHPTVSNPFGINAASLGSGMFNSPEMQALLQQISE
NPQLMQNVISAPYMRSMMQTLAQNPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQ
MQNPESLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGISRTPAPSAGSNAG
STPEAPTSSPATPATSSPTGASSAQQQLMQQMIQLLAGSGNSQVQTPEVRFQQQLEQL
NSMGFINREANLQALIATGGDINAAIERLLGSQLS"
BASE COUNT 817 a 1024 c 926 g 778 t
ORIGIN
1 gggcggccgg gtggcggcgg cggcatggcg gagccgagcg gggccgagac gaggcccccc
61 attcgggtca ccgtcaagac ccccaaggac aaggaggaaa ttgtgatctg cgatcgagcc
121 tcggtcaagg agttcaaaga ggaaatctcc cggaggttta aggctcagca ggatcagctg
181 gtcctgatct tcgcaggcaa gatcctcaag gatggggaca cactgaacca gcacggaatc
241 aaggacgggc tcactgtcca tctggtcatc aagacccctc agaaggctca agatccagct
301 gctgccactg cttcttcccc ctccacacct gaccctgcct cagcaccctc caccacgcct
361 gcttcacccg ccacccctgc ccagccctcc acctctggca gtgcctcttc agatgctggc
421 agtggaagcc ggaggagcag tggtgggggg ccctctccgg gggctgggga gggatccccc
481 agtgctactg cgtccatact ctctggcttt gggggcatcc tggggctggg cagcctaggc
541 ctgggctctg ccaacttcat ggagctgcag cagcagatgc agcggcagct gatgtccaat
601 cctgagatgc tgtcacagat catggagaac cccctggtcc aggatatgat gtctaaccct
661 gatctgatgc gtcacatgat tatggccaac ccccagatgc agcagttgat ggagcggaac
721 cctgagatca gccacatgct caataaccct gaactcatga ggcagacaat ggagcttgct
781 cggaatccag ccatgatgca agagatgatg cggaaccagg accgggccct gagcaacctt
841 gagagcatcc ctggagggta taatgccctc cgccgcatgt acacggacat ccaggagccc
901 atgttcagtg ctgcccggga acagtttggc aacaatccct tctcttccct ggccgggaac
961 tccgacagct catcctccca gcctctgcgg actgagaatc gagagcccct ccctaacccc
1021 tggagcccct cgccccccac ctcccaggcc cccgggtccg gtggggaggg caccggagga
1081 tcggggacca gccaggtgca cccgacagtc tcgaacccct ttgggatcaa tgcggctagc
1141 ctggggtcag ggatgttcaa tagcccagaa atgcaagccc tcctccagca gatctctgag
1201 aacccccagc tgatgcagaa tgtgatctca gcaccctaca tgcgcagcat gatgcagacg
1261 cttgcccaga accccgactt tgctgctcag atgatggtga atgtgccgct cttcgcgggg
1321 aacccccaac tgcaggagca gctccgcctg cagctcccag tcttcctgca gcagatgcag
1381 aacccagagt cactctccat ccttaccaat ccccgagcca tgcaggcatt gctgcagatc
1441 cagcagggac tacagacctt gcagaccgag gcccctgggc tggtacccag ccttggctcc
1501 tttgggatat cccggacccc agcaccctca gcaggcagca acgcagggtc tacgcccgag
1561 gcccccactt cctcaccagc cacgccagcc acatcttctc caacaggggc ttccagcgcc
1621 cagcagcaac tcatgcagca gatgatccag cttttggctg gaagtggaaa ctcacaggtg
1681 cagacgccag aagtgagatt tcagcagcag ctggagcagc tcaactccat gggcttcatc
1741 aatcgtgagg ctaacctgca ggccctgatt gccacaggag gggacatcaa cgcagctatc
1801 gagagactgc tgggctccca gctctcctaa tccctcggcc catgcctcct gcctctcccc
1861 tccctcgatg tcagcattcg gttcttctgt caatccttac cctctgcagc ttgtcctccc
1921 ttccgtcttc tccctcatcc tttccaaaca gcagggtgac tttagaggca tgggctccaa
1981 ccccttagct ctgtctgaga attatggttt tactgctacg tctctaacag actcttctct
2041 cctggtctcc ttgagcagtg ctacttaaac agttttcaca gtttcattga ttgactctac
2101 ctccttgccc cacaccactt ttgcaatctt taaactttca gtggctgtgc agagtcgagg
2161 gaggaaccag ctctctggtt tactggaaca tagtcttcca tctataccac tagggttttg
2221 tcttatgttt acttttggta actctcttcc ttctttttct ccctaccccc caacccctag
2281 cccaaccaat gctagaattt cttgctctga aggaggagca ggtgaaacag gtggtaattt
2341 tccttctcgg cccctattct ggttcattca gcactttttg gtgggaactg ttggaaattc
2401 cagggtaagg aggaagatgc ctgttctccc tgtctgaaga gggagatgag acagctctct
2461 ggacaggaat taacaaacgc tggagcagcc cagaggaaat tcgtgtgaaa gaggagggaa
2521 tgagattatt cggaggaagg gaatggggga gacagcctga gtaaaaggct tggaagttgg
2581 aattagcagt ggggagcaga agcactcata gctcttttag gcagaagaat ccaggcccga
2641 gctggcagaa gagacttaga gatgctaatg gaatttaaac tgaaaaaagg agcccaatga
2701 agctaagcgc cacgccccac aaggggtcat attggcttta gttcctcaag catatgtgct
2761 tatatgcaca cacacacaca tttccatgga cccaggtctt gcttgtgtcc ccaggcacca
2821 gtagtttgag cccccctcaa aagacatgaa gggggttggg gtctgtgtga gtagtgggga
2881 ggtgcatgtg tatccacatg tgtgcataca ctcttaagtt gggtgggaag tggattcctt
2941 gttggtttct ggttcagagt gctctcccac caccagagac aagtgggtaa aaaggtcagt
3001 ccattgcagg aatatatatc cgggagagct aggtcccttg gggctctgga tgctgggtaa
3061 cccagaggta atgtgggtac cctttctgaa gctgtcaggg ctgtgactag cacccttatc
3121 acccctcact gccttgtggg aatagtagag ggtttttttc ctccagagcc cctggccttt
3181 cagttcttaa ctatttccct ccaggccaga aagttttctt tgaggaagga gaggagaggg
3241 tggcaatgat gcctttgatc tggaattgga catttctctg tcagagcaca gaggaggctc
3301 atatcacctc ttccctctcc tacttggccc agctgcttgg aggaccgacc ccatggctga
3361 gaatatgacg gcaagaggaa cagagtttgc tccaagtggg aaagggtccc aagcagtcca
3421 gagaagatgt ctgtgtggct ttccctccct gcctccccca gctcccacac tggcctttgt
3481 aaataaatgg cgtggtcttt gttgtgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3541 aaaaa
//