LOCUS BC063814 2233 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens glutamate receptor, ionotropic, kainate 2, mRNA (cDNA
clone MGC:74427 IMAGE:6189201), complete cds.
ACCESSION BC063814
VERSION BC063814.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2233)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2233)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: f Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28558991.
FEATURES Location/Qualifiers
source 1..2233
/db_xref="H-InvDB:HIT000261192"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74427 IMAGE:6189201"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2233
/gene="GRIK2"
/gene_synonym="EAA4"
/gene_synonym="GLR6"
/gene_synonym="GLUR6"
/db_xref="GeneID:2898"
/db_xref="MIM:138244"
CDS 204..1955
/gene="GRIK2"
/gene_synonym="EAA4"
/gene_synonym="GLR6"
/gene_synonym="GLUR6"
/codon_start=1
/product="GRIK2 protein"
/protein_id="AAH63814.1"
/db_xref="GeneID:2898"
/db_xref="MIM:138244"
/translation="MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEY
VESGPMGAEELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLG
VAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAI
LDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEM
KRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNM
TGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAV
QQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVI
SLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTTILEEPYVLFKKSD
KPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDH
KADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMY
ILLAYLGVSCVLFVIAR"
BASE COUNT 625 a 473 c 485 g 650 t
ORIGIN
1 gaaggttgtt ccttggcgca gtgagtgaag aacatgcagc gattgctaat gggtttggga
61 agcggagact ccttcctctc tctatgacca tgccgtgatc gtgtctgcgg tcaccactcg
121 acgcatcctc atttctaccc gaacccagga gccgaacgct agatcgggga agtgggtgcc
181 gtgcgtgtgg gcacagaaac accatgaaga ttattttccc gattctaagt aatccagtct
241 tcaggcgcac cgttaaactc ctgctctgtt tactgtggat tggatattct caaggaacca
301 cacatgtatt aagatttggt ggtatttttg aatatgtgga atctggccca atgggagctg
361 aggaacttgc attcagattt gctgtgaaca caattaacag aaacagaaca ttgctaccca
421 atactaccct tacctatgat acccagaaga taaaccttta tgatagtttt gaagcatcca
481 agaaagcctg tgatcagctg tctcttgggg tggctgccat cttcgggcct tcacacagct
541 catcagcaaa cgcagtgcag tccatctgca atgctctggg agttccccac atacagaccc
601 gctggaagca ccaggtgtca gacaacaaag attccttcta tgtcagtctc tacccagact
661 tctcttcact cagccgtgcc attttagacc tggtgcagtt tttcaagtgg aaaaccgtca
721 cggttgtgta tgatgacagc actggtctca ttcgtttgca agagctcatc aaagctccat
781 caaggtataa tcttcgactc aaaattcgtc agttacctgc tgatacaaag gatgcaaaac
841 ccttactaaa agaaatgaaa agaggcaagg agtttcatgt aatctttgat tgtagccatg
901 aaatggcagc aggcatttta aaacaggcat tagctatggg aatgatgaca gaatactatc
961 attatatctt taccactctg gacctctttg ctcttgatgt tgagccctac cgatacagtg
1021 gtgttaacat gacagggttc agaatattaa atacagaaaa tacccaagtc tcctccatca
1081 ttgaaaagtg gtcgatggaa cgattgcagg cacctccgaa acccgattca ggtttgctgg
1141 atggatttat gacgactgat gctgctctaa tgtatgatgc tgtgcatgtg gtgtctgtgg
1201 ccgttcaaca gtttccccag atgacagtca gttccttgca gtgtaatcga cataaaccct
1261 ggcgcttcgg gacccgcttt atgagtctaa ttaaagaggc acattgggaa ggcctcacag
1321 gcagaataac tttcaacaaa accaatggct tgagaacaga ttttgatttg gatgtgatca
1381 gtctgaagga agaaggtcta gaaaagattg gaacgtggga tccagccagt ggcctgaata
1441 tgacagaaag tcaaaaggga aagccagcga acatcacaga ttccttatcc aatcgttctt
1501 tgattgttac caccattttg gaagagcctt atgtcctttt taagaagtct gacaaacctc
1561 tctatggtaa tgatcgattt gaaggctatt gcattgatct cctcagagag ttatctacaa
1621 tccttggctt tacatatgaa attagacttg tggaagatgg gaaatatgga gcccaggatg
1681 atgccaatgg acaatggaat ggaatggttc gtgaactaat tgatcataaa gctgaccttg
1741 cagttgctcc actggctatt acctatgttc gagagaaggt catcgacttt tccaagccct
1801 ttatgacact tggaataagt attttgtacc gcaagcccaa tggtacaaac ccaggcgtct
1861 tctccttcct gaatcctctc tcccctgata tctggatgta tattctgctg gcttacttgg
1921 gtgtcagttg tgtgctcttt gtcatagcca ggtaacatgc tcacttttgt gatttttttg
1981 gcaattgtta cctcctttat ctaactaata attgtcaaaa gtcacaatca attttacttt
2041 ttctgttctt tattttccat ggggtgctga gaaataatga aattttaaga atcacattca
2101 tttattaaaa tgtactgtcc tgtctttgtg ggcagagagc atgctggttg tgtcagtaag
2161 ctataagtgt tatagggatt actgttttct taaccagaat ataaaagctt tttaaatcaa
2221 aaaaaaaaaa aaa
//