LOCUS BC063653 1093 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens hypothetical gene supported by BC063653, mRNA (cDNA
clone IMAGE:4802640), complete cds.
ACCESSION BC063653
VERSION BC063653.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1093)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1093)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: n Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1093
/db_xref="H-InvDB:HIT000261107"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4802640"
/tissue_type="Skin, normal"
/clone_lib="NCI_CGAP_Skn3"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1093
/gene="LOC441239"
/db_xref="GeneID:441239"
CDS 362..1063
/gene="LOC441239"
/codon_start=1
/product="LOC441239 protein"
/protein_id="AAH63653.1"
/db_xref="GeneID:441239"
/translation="MVLGVQLHSQTASRAFAGRRGPRATVPEQTQAAPVSSSPAAFQQ
RGDPHPRQPHLTVPLRSEETVEDRVAPGAARNQGDLEETGNLASRGDAAPGKGLPPPA
SELSSARASPPQRGPDPCLAPGARTVPSAKRLRSRKWPPQCTSRQHGVGSGSVSIRLC
GAGCERDSPIPLSSRSRTSHPEDFAEDAAPWSGAENRSRPPRSCWVVEKVEGGQVLSA
TVKIKIIIIKNEWVS"
BASE COUNT 244 a 333 c 343 g 173 t
ORIGIN
1 cctcacagcc ctgagtgagg gtgtgcagcc tccttgggca agaggatgcg ggctctggga
61 ggctgcgtcg cacatctcca gtccccactg cagggcctct caccggctgg ggcagtgacc
121 cctggtcgga agcacctcag tgctgctcat gattgcagag gtggcctcac cagatagagg
181 gtcctggagg gcgtgggggc ttggtctctg actgccagca aaagaagccg acatagaggc
241 agcaggcgac aaacactgag gcaactgact tgcccgaatt taaccctcag gttttttaaa
301 taaaatgcaa gtgcaggggc ttgggctcgg gactcctgga gccccgtggg gctgagcgtg
361 gatggtgctc ggtgtccagc tacactccca aaccgcatcc cgagcgtttg cggggcggag
421 gggccccagg gcgacggttc cagaacagac ccaggcggct ccggtcagca gcagccccgc
481 tgctttccaa cagcgcgggg acccccatcc ccgccagccc catctcactg tccctctcag
541 gtcagaggag accgtagagg accgcgtggc accaggagct gccaggaacc agggcgacct
601 agaagaaacc gggaacctgg cgtcccgcgg ggacgcagcc ccaggaaagg ggctgccgcc
661 gccagcaagt gagctcagct cagcccgggc gtcccctccg caacgaggcc cggatccctg
721 cttggctccc ggagcccgga ctgtgccttc cgcaaaacgg ctgcgctcta gaaagtggcc
781 tccacagtgc acttcccggc agcatggagt cggcagtggc agcgtttcta tccggctctg
841 cggggctggg tgtgaacggg actctcccat cccgctgtcc tccaggagcc ggacctctca
901 ccccgaagac tttgccgaag acgcggcccc ctggtcaggg gcagaaaaca gatccaggcc
961 gccccgctcc tgctgggtgg tggagaaggt ggagggcggg caggtgctaa gtgctactgt
1021 gaaaataaaa atcatcataa taaagaacga atgggtttcg taaaaaaaaa aaaaaaaaaa
1081 aaaaaaaaaa aaa
//