LOCUS BC063607 2510 bp mRNA linear HUM 30-MAR-2004
DEFINITION Homo sapiens ATPase family, AAA domain containing 3A, mRNA (cDNA
clone MGC:74860 IMAGE:4939339), complete cds.
ACCESSION BC063607
VERSION BC063607.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2510)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2510)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: o Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13994293.
FEATURES Location/Qualifiers
source 1..2510
/db_xref="H-InvDB:HIT000261062_01"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74860 IMAGE:4939339"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2510
/gene="ATAD3A"
/gene_synonym="FLJ10709"
/db_xref="GeneID:55210"
CDS 85..1845
/gene="ATAD3A"
/gene_synonym="FLJ10709"
/codon_start=1
/product="ATAD3A protein"
/protein_id="AAH63607.1"
/db_xref="GeneID:55210"
/translation="MSWLFGINKGPKGEGAGPPPPLPPAQPGAEGGGDRGLGDRPAPK
DKWSNFDPTGLERAAKAARELEHSRYAKDALNLAQMQEQTLQLEQQSKLKEYEAAVEQ
LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQE
ESVQKQEAMRRATVEREMELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEH
RQTVLESIRTAGTLFGEGFRAFVTDWDKVTATVAGLTLLAVGVYSAKNATLVAGRFIE
ARLGKPSLVRETSRITVLEALRHPIQVSRRLLSRPQDALEGVVLSPSLEARVRDIAIA
TRNTKKNRSLYRNILMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAM
HKLFDWANTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSNKFMLV
LASNQPEQFDWAINDRINEMVHFDLPGQEERERLVRMYFDKYVLKPATEGKQRLKLAQ
FDYGRKCSEVARLTEGMSGREIAQLAVSWQATAYASEDGVLTEAMMDTRVQDAVQQHQ
QKMCWLKAEGPGRGDEPSPS"
misc_feature 1123..1707
/gene="ATAD3A"
/gene_synonym="FLJ10709"
/note="AAA; Region: ATPase family associated with various
cellular activities (AAA). AAA family proteins often
perform chaperone-like functions that assist in the
assembly, operation, or disassembly of protein complexes"
/db_xref="CDD:pfam00004"
BASE COUNT 533 a 742 c 859 g 376 t
ORIGIN
1 ggcgcgtgga ggctgctccc agccgcgcgc gagtcagact cgggtggggg tcccggcggc
61 ggtagcggcg gcggcggtgc gagcatgtcg tggctcttcg gcattaacaa gggccccaag
121 ggtgaaggcg cggggccgcc gccgcctttg ccgcccgcgc agcccggggc cgagggcggc
181 ggggaccgcg ggttgggaga ccggccggcg cccaaggaca aatggagcaa cttcgacccc
241 accggcctgg agcgcgccgc caaggcggcg cgcgagctgg agcactcgcg ttatgccaag
301 gacgccctga atctggcaca gatgcaggag cagacgctgc agttggagca acagtccaag
361 ctcaaagagt atgaggccgc cgtggagcag ctcaagagcg agcagatccg ggcgcaggct
421 gaggagagga ggaagaccct gagcgaggag acccggcagc accaggccag ggcccagtat
481 caagacaagc tggcccggca gcgctacgag gaccaactga agcagcagca acttctcaat
541 gaggagaatt tacggaagca ggaggagtcc gtgcagaagc aggaagccat gcggcgagcc
601 accgtggagc gggagatgga gctgcggcac aagaatgaga tgctgcgagt ggaggccgag
661 gcccgggcgc gcgccaaggc cgagcgggag aatgcagaca tcatccgcga gcagatccgc
721 ctgaaggcgg ccgagcaccg tcagaccgtc ttggagtcca tcaggacggc tggcaccttg
781 tttggggaag gattccgtgc ctttgtgaca gactgggaca aagtgacagc cacggtggct
841 gggctgacgc tgctggctgt tggggtctac tcagccaaga atgccacgct tgtcgccggc
901 cgcttcatcg aggctcggct ggggaagccg tccctagtga gggagacgtc ccgcatcacg
961 gtgcttgagg cgctgcggca ccccatccag gtcagccggc ggctcctcag tcgaccccag
1021 gacgcgctgg agggtgttgt gctcagtccc agcctggaag cacgggtgcg cgacatcgcc
1081 atagcaacaa ggaacaccaa gaagaaccgc agcctgtaca ggaacatcct gatgtacggg
1141 ccaccaggca ccgggaagac gctgtttgcc aagaaactcg ccctgcactc aggcatggac
1201 tacgccatca tgacaggcgg ggacgtggcc cccatggggc gggaaggcgt gaccgccatg
1261 cacaagctct ttgactgggc caataccagc cggcgcggcc tcctgctctt tgtggatgaa
1321 gcggacgcct tccttcggaa gcgagccacc gagaagataa gcgaggacct cagggccaca
1381 ctgaacgcct tcctgtaccg cacgggccag cacagcaaca agttcatgct ggtcctggcc
1441 agcaaccaac cagagcagtt cgactgggcc atcaatgacc gcatcaatga gatggtccac
1501 ttcgacctgc cagggcagga ggaacgggag cgcctggtga gaatgtattt tgacaagtat
1561 gttcttaagc cggccacaga aggaaagcag cgcctgaagc tggcccagtt tgactacggg
1621 aggaagtgct cggaggtcgc tcggctgacg gagggcatgt cgggccggga gatcgctcag
1681 ctggccgtgt cctggcaggc cacggcgtat gcctccgagg acggggtcct gaccgaggcc
1741 atgatggaca cccgcgtgca agatgctgtc cagcagcacc agcagaagat gtgctggctg
1801 aaggcggaag ggcctgggcg tggggacgag ccctccccat cctgagtcca cagggagatc
1861 cacagctcac ggagcctggc cgcggacccc tcccacccct gccttgccgg cccctgcaca
1921 tttaggatat gctcctggat ggggactggg ctgtgcccag ggcctctgtc ccccaggatg
1981 tcttgtggtg gcggtcggtc gttctgcccc ccagggcacc ccctgttgta ggcactggct
2041 agggaggggc aggcctcctt cctgcccctc gagacactct tgggagatgc attttccgtc
2101 tggctcacag ggggagggtg aggctttgca ccccagcccc tgcccaggcc actgtgaggg
2161 tgggtgctgg ctgagccccc ggggcagcag gagccaggca ggtgatgtct ttgttctcgg
2221 ctcccacagc agagccaggt gagggggcgc ctgccagggc cagacccagg tggggcagcc
2281 tgaaccctgc ttccccctgt ggccggcatg ccccgatctt tcacacactg gtgaccctga
2341 gagaggaggg aggagggaac ctggcggggg tgtctgaggc cgcactgtca gctggccggt
2401 ccaagcctgt ggctggagct ggggtctgtt tacctaataa agtcccacag gtgcctcatt
2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//