LOCUS BC063567 2367 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens kinesin family member C1, mRNA (cDNA clone
IMAGE:4178503).
ACCESSION BC063567
VERSION BC063567.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2367)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2367)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: a Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction, Similarity but not identity
to protein.
FEATURES Location/Qualifiers
source 1..2367
/db_xref="H-InvDB:HIT000261023_05"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4178503"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2367
/gene="KIFC1"
/gene_synonym="HSET"
/gene_synonym="MKLP2"
/gene_synonym="RAB6-KIFL"
/db_xref="GeneID:3833"
/db_xref="HGNC:HGNC:6389"
/db_xref="MIM:603763"
CDS <1..2130
/gene="KIFC1"
/gene_synonym="HSET"
/gene_synonym="MKLP2"
/gene_synonym="RAB6-KIFL"
/codon_start=1
/product="kinesin family member C1"
/protein_id="AAH63567.1"
/db_xref="GeneID:3833"
/db_xref="HGNC:HGNC:6389"
/db_xref="MIM:603763"
/translation="VLYPASRAGERTRVPGSPAPSSLPLHSPGACGTEVDMDPQRSPL
LEVKGNIELKRPLIKAPSQLPLSGSRLKRRPDQMEDGLEPEKKRTRGLGATTKITTSH
PRVPSLTTVPQTQGQTTAQKVSKKTGPRCSTAIATGLKNQKPVPAVPVQKSGTSGVPP
MAGGKKPSKRPAWDLKGQLCDLNAELKRCRERTQTLDQENQQLQDQLRDAQQQVKALG
TERTTLEGHLAKVQAQAEQGQQELKNLRACVLELEERLSTQEGLVQELQKKQVELQEE
RRGLMSQLEEKERRLQTSEAALSSSQAEVASLRQETVAQAALLTEREERLHGLEMERR
RLHNQLQELKGNIRVFCRVRPVLPGEPTPPPGLLLFPSGPGGPSDPPTRLSLSRSDER
RGTLSGAPAPPTRHDFSFDRVFPPGSGQDEVFEEIAMLVQSALDGYPVCIFAYGQTGS
GKTFTMEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTYSFVASYVEIYNETVRDL
LATGTRKGQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVARTA
QNERSSRSHSVFQLQISGEHSSRGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRE
TQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEEN
VSESLNSLRFASKVNQCVIGTAQANRK"
BASE COUNT 571 a 632 c 702 g 462 t
ORIGIN
1 gttctctacc ctgcttcgcg agcgggcgag agaacgcgag tcccaggatc cccggcaccc
61 agttctcttc cactgcattc ccccggcgcg tgtgggaccg aggtggacat ggatccgcag
121 aggtcccccc tattggaagt aaaggggaac atagaactga agagacctct gattaaggcc
181 ccttcccagc tgcctctctc aggaagcaga ctcaagagga ggcctgacca gatggaagat
241 ggcctggagc ctgagaagaa acggacaaga ggcctgggtg caacgaccaa aattaccaca
301 tcccacccaa gagttccatc cctcactaca gtgccacaga cacaaggcca gaccacagct
361 caaaaagttt ccaagaagac aggaccccgg tgttccacag ctattgccac agggttgaag
421 aaccagaagc cagttcctgc tgttcctgtc cagaagtctg gcacatcagg tgttcctccc
481 atggcaggag ggaagaaacc cagcaaacgt ccagcctggg acttaaaggg tcagttatgt
541 gacctaaatg cagaactaaa acggtgccgt gagaggactc aaacgttgga ccaagagaac
601 cagcagcttc aggaccagct cagagatgcc cagcagcagg tcaaggccct ggggacagag
661 cgcacaacac tggaggggca tttagccaag gtacaggccc aggctgagca gggccaacag
721 gagctgaaga acttgcgtgc ttgtgtcctg gagctggaag agcggctgag cacgcaggag
781 ggcttggtgc aagagcttca gaaaaaacag gtggaattgc aggaagaacg gaggggactg
841 atgtcccaac tagaggagaa ggagaggagg ctgcagacat cagaagcagc cctgtcaagc
901 agccaagcag aggtggcatc tctgcggcag gagactgtgg cccaggcagc cttactgact
961 gagcgggaag aacgtcttca tgggctagaa atggagcgcc ggcgactgca caaccagctg
1021 caggaactca agggcaacat ccgtgtattc tgccgggtcc gccctgtcct gccgggggag
1081 cccactccac cccctggcct cctcctgttt ccctctggcc ctggtgggcc ctctgatcct
1141 ccaacccgcc ttagcctctc ccggtctgac gagcggcgtg ggaccctgag tggggcacca
1201 gctcccccaa ctcgccatga tttttccttt gaccgggtat tcccaccagg aagtggacag
1261 gatgaagtgt ttgaagagat tgccatgctt gtccagtcag ccctggatgg ctatccagta
1321 tgcatctttg cctatggcca gacaggcagt ggcaagacct tcacaatgga gggtgggcct
1381 gggggagacc cccagttgga ggggctgatc cctcgggccc tgcggcacct cttctctgtg
1441 gctcaggagc tgagtggtca gggctggacc tacagctttg tagcaagcta cgtagagatc
1501 tacaatgaga ctgtccggga cctgctggcc actggaaccc ggaagggtca agggggcgag
1561 tgtgagattc gccgtgcagg gccagggagt gaggagctca ctgtcaccaa tgctcgatat
1621 gtccctgtct cctgtgagaa agaagtggac gccctgcttc atctggcccg ccagaatcgg
1681 gctgtggccc gcacagccca gaatgaacgg tcatcacgca gccacagtgt attccagcta
1741 cagatttctg gggagcactc cagccgaggc ctgcagtgtg gggcccccct cagtcttgtg
1801 gacctggccg ggagtgagcg acttgacccc ggcttagccc tcggccccgg ggagcgggaa
1861 cgccttcggg aaacacaggc cattaacagc agcctgtcca cgctggggct ggttatcatg
1921 gccctgagca acaaggagtc ccacgtgcct taccggaaca gcaaactgac ctacctgctg
1981 cagaactctc tgggtggtag tgctaagatg ctcatgtttg tgaacatttc tccactggaa
2041 gagaacgtct ccgagtccct caactctcta cgctttgcct ccaaggtgaa ccagtgtgtt
2101 attggtactg ctcaggccaa caggaagtga agacggatcc agatctgtgt gtgtgtgtgt
2161 gtgtgtgtgt gtgtgtgtgt gtgtgtgtcc ctatgtctat gtatcgggtg aggggtggga
2221 gggttgctgg agggtgcttt attgggtgga gggcaccatg tcccagggct atcaaataaa
2281 gaatagtttg gttttttttt taaataaagg ttttattagc atttgcccaa aaaaaaaaaa
2341 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//