LOCUS BC063507 2537 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heat shock 70kDa protein 1B, mRNA (cDNA clone
MGC:74463 IMAGE:4153196), complete cds.
ACCESSION BC063507
VERSION BC063507.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2537)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2537)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: a Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 26787974.
FEATURES Location/Qualifiers
source 1..2537
/db_xref="H-InvDB:HIT000260966"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74463 IMAGE:4153196"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2537
/gene="HSPA1B"
/gene_synonym="HSP70-2"
/db_xref="GeneID:3304"
/db_xref="HGNC:HGNC:5233"
/db_xref="MIM:603012"
CDS 199..2124
/gene="HSPA1B"
/gene_synonym="HSP70-2"
/codon_start=1
/product="heat shock 70kDa protein 1B"
/protein_id="AAH63507.1"
/db_xref="GeneID:3304"
/db_xref="HGNC:HGNC:5233"
/db_xref="MIM:603012"
/translation="MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF
TDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPK
VQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKD
AGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFE
VKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSS
STQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDL
VLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLL
LLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMT
KDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKG
RLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEAD
KKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAGGPGPGGFGA
QGPKGGSGSGPTIEEVD"
BASE COUNT 582 a 694 c 778 g 483 t
ORIGIN
1 ggagctgctg cgagggtccg cttcgtcttt cgagagtgac tcccgcggtc ccaaggcttt
61 ccagagcgaa cctgtgcggc tgcaggcacc ggcgtgttga gtttccggcg ttccgaagga
121 ctgagctctt gtcgcggatc ccgtccgccg tttccagccc ccagtctcag agcggagccc
181 acagagcagg gcaccggcat ggccaaagcc gcggcgatcg gcatcgacct gggcaccacc
241 tactcctgcg tgggggtgtt ccaacacggc aaggtggaga tcatcgccaa cgaccagggc
301 aaccgcacca cccccagcta cgtggccttc acggacaccg agcggctcat cggggatgcg
361 gccaagaacc aggtggcgct gaacccgcag aacaccgtgt ttgacgcgaa gcggctgatc
421 ggccgcaagt tcggcgaccc ggtggtgcag tcggacatga agcactggcc tttccaggtg
481 atcaacgacg gagacaagcc caaggtgcag gtgagctaca agggggagac caaggcattc
541 taccccgagg agatctcgtc catggtgctg accaagatga aggagatcgc cgaggcgtac
601 ctgggctacc cggtgaccaa cgcggtgatc accgtgccgg cctacttcaa cgactcgcag
661 cgccaggcca ccaaggatgc gggtgtgatc gcggggctca acgtgctgcg gatcatcaac
721 gagcccacgg ccgccgccat cgcctacggc ctggacagaa cgggcaaggg ggagcgcaac
781 gtgctcatct ttgacctggg cgggggcacc ttcgacgtgt ccatcctgac gatcgacgac
841 ggcatcttcg aggtgaaggc cacggccggg gacacccacc tgggtgggga ggactttgac
901 aacaggctgg tgaaccactt cgtggaggag ttcaagagaa aacacaagaa ggacatcagc
961 cagaacaagc gagccgtgag gcggctgcgc accgcctgcg agagggccaa gaggaccctg
1021 tcgtccagca cccaggccag cctggagatc gactccctgt ttgagggcat cgacttctac
1081 acgtccatca ccagggcgag gttcgaggag ctgtgctccg acctgttccg aagcaccctg
1141 gagcccgtgg agaaggctct gcgcgacgcc aagctggaca aggcccagat tcacgacctg
1201 gtcctggtcg ggggctccac ccgcatcccc aaggtgcaga agctgctgca ggacttcttc
1261 aacgggcgcg acctgaacaa gagcatcaac cccgacgagg ctgtggccta cggggcggcg
1321 gtgcaggcgg ccatcctgat gggggacaag tccgagaacg tgcaggacct gctgctgctg
1381 gacgtggctc ccctgtcgct ggggctggag acggccggag gcgtgatgac tgccctgatc
1441 aagcgcaact ccaccatccc caccaagcag acgcagatct tcaccaccta ctccgacaac
1501 caacccgggg tgctgatcca ggtgtacgag ggcgagaggg ccatgacgaa agacaacaat
1561 ctgttggggc gcttcgagct gagcggcatc cctccggccc ccaggggcgt gccccagatc
1621 gaggtgacct tcgacatcga tgccaacggc atcctgaacg tcacggccac ggacaagagc
1681 accggcaagg ccaacaagat caccatcacc aacgacaagg gccgcctgag caaggaggag
1741 atcgagcgca tggtgcagga ggcggagaag tacaaagcgg aggacgaggt gcagcgcgag
1801 agggtgtcag ccaagaacgc cctggagtcc tacgccttca acatgaagag cgccgtggag
1861 gatgaggggc tcaagggcaa gatcagcgag gcggacaaga agaaggttct ggacaagtgt
1921 caagaggtca tctcgtggct ggacgccaac accttggccg agaaggacga gtttgagcac
1981 aagaggaagg agctggagca ggtgtgtaac cccatcatca gcggactgta ccagggtgcc
2041 ggtggtcccg ggcctggcgg cttcggggct cagggtccca agggagggtc tgggtcaggc
2101 cctaccattg aggaggtgga ttaggggcct ttgttcttta gtatgtttgt ctttgaggtg
2161 gactgttggg actcaaggac tttgctgctg ttttcctatg tcatttctgc ttcagctctt
2221 tgctgcttca cttctttgta aagttaagtt gtaacctgat ggtaattagc tggcttcatt
2281 atttttgtag tacaaccgat atgttcatta gaattctttg catttaatgt tgatactgta
2341 agggtgtttc gttcccttta aatgaatcaa cactgccacc ttctgtacga gtttgtttgt
2401 tttttttttt tttttttttt ttgcttggcg aaaacactac aaaggctggg aatgtatgtt
2461 tttataattt gtttatttaa atatgaaaaa taaaatgtta aactttaaaa aaaaaaaaaa
2521 aaaaaaaaaa aaaaaaa
//