LOCUS BC063036 1614 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens tubulin, alpha 1c, mRNA (cDNA clone MGC:64889
IMAGE:4397636), complete cds.
ACCESSION BC063036
VERSION BC063036.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1614)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1614)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: a Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31880337.
FEATURES Location/Qualifiers
source 1..1614
/db_xref="H-InvDB:HIT000260743"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:64889 IMAGE:4397636"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1614
/gene="TUBA1C"
/gene_synonym="bcm948"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
CDS 123..1472
/gene="TUBA1C"
/gene_synonym="bcm948"
/codon_start=1
/product="tubulin, alpha 1c"
/protein_id="AAH63036.1"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
/translation="MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGG
GDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANN
YARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD
YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD
IERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVI
SAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAT
IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLD
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADGEDEGEEY"
BASE COUNT 380 a 431 c 406 g 397 t
ORIGIN
1 cggacgcgtg ggtccggacg cgtgggcgac ccacgcgtcc gccttggtag tctgttagtg
61 ggagatcctt gttgccgtcc cttcgcctcc ttcaccgccg cagacccctt caagttctag
121 tcatgcgtga gtgcatctcc atccacgttg gccaggctgg tgtccagatt ggcaatgcct
181 gctgggagct ctactgcctg gaacacggca tccagcccga tggccagatg ccaagtgaca
241 agaccattgg gggaggagat gattccttca acaccttctt cagtgaaacg ggtgctggca
301 agcatgtgcc ccgggcagtg tttgtagact tggaacccac agtcattgat gaagttcgca
361 ctggcactta ccgccagctc ttccaccctg agcaactcat cacaggcaag gaagatgctg
421 ccaataacta tgcccgaggg cactacacca ttggcaagga gatcattgac ctcgtgttgg
481 accgaattcg caagctggct gaccagtgca ccggtcttca gggcttcttg gttttccaca
541 gctttggtgg gggaactggt tctgggttca cctcgctgct catggaacgt ctctcagttg
601 attatggcaa gaagtccaag ctggagttct ccatttaccc ggcgccccag gtttccacag
661 ctgtagttga gccctacaac tccatcctca ccacccacac caccctggag cactctgatt
721 gtgccttcat ggtagacaat gaggccatct atgacatctg tcgtagaaac ctcgatatcg
781 agcgcccaac ctacactaac cttaaccgcc ttattagcca gattgtgtcc tccatcactg
841 cttccctgag atttgatgga gccctgaatg ttgacctgac agaattccag accaacctgg
901 tgccctaccc ccgcatccac ttccctctgg ccacatatgc ccctgtcatc tctgctgaga
961 aagcctacca tgaacagctt actgtagcag agatcaccaa tgcttgcttt gagccagcca
1021 accagatggt gaaatgtgac cctcgccatg gtaaatacat ggcttgctgc ctgttatacc
1081 gtggtgacgt ggttcccaaa gatgtcaatg ctgccattgc caccatcaaa accaagcgta
1141 ccatccagtt tgtggattgg tgccccactg gcttcaaggt tggcattaat taccagcctc
1201 ccactgtggt gcctggcgga gacctggcca aggtacagag agctgtgtgc atgctgagca
1261 ataccacagc tgttgccgag gcctgggctc gcctggacca caagtttgac ctgatgtatg
1321 ccaagcgtgc ctttgttcac tggtacgtgg gtgaggggat ggaggaaggc gagttttcag
1381 aggcccgtga ggacatggct gcccttgaga aggattatga ggaggttgga gcagatagtg
1441 ctgacggaga ggatgagggt gaagagtatt aacctgtgtg ctgtactttt acactccttt
1501 gtcttggaac tgtcttattt ttgttctgta aatgtctatt gccgtaaatt gttaataaaa
1561 ttgatgtttc cattttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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