LOCUS BC062795 1397 bp mRNA linear HUM 16-JUN-2008
DEFINITION Homo sapiens leucine-rich repeats and IQ motif containing 3, mRNA
(cDNA clone IMAGE:6104681), complete cds.
ACCESSION BC062795
VERSION BC062795.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1397)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1397)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: l Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1397
/db_xref="H-InvDB:HIT000260686"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6104681"
/tissue_type="Testis"
/clone_lib="NIH_MGC_82"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1397
/gene="LRRIQ3"
/db_xref="GeneID:127255"
/db_xref="HGNC:HGNC:28318"
CDS 130..795
/gene="LRRIQ3"
/codon_start=1
/product="LRRIQ3 protein"
/protein_id="AAH62795.1"
/db_xref="GeneID:127255"
/db_xref="HGNC:HGNC:28318"
/translation="MKEFFAPQRAGMKLRTFSDIDKYYTEQKKQEYHKEKVRVVAMAQ
VARERVRVAVNEHLNQKKYATQKLIEENKETIQNSLRQVWQNRFNYLEKARERKALFL
KEKSQKASERLLVQNLNNERTLLTRGLLKIDRLEKNEAVLKEKSLIVKQKLKAEKYRK
NLLKEMKKVRSQEIYKRHCEEKFVMDMIAFEKACERLQDAKTKVAIVKTNLDFKVPNG
LIK"
BASE COUNT 573 a 193 c 219 g 412 t
ORIGIN
1 gggggttcat tgaagaataa tgcagtattg agagagaaaa aacaacattt ttttcctgca
61 tatcctcagc caatctatac tactcatcca aagccaatca ttaaaaaaga catacgattg
121 gagcggagta tgaaagagtt ttttgcacca caaagagctg gtatgaaact ccgaacattt
181 agtgatattg acaaatatta cacagaacaa aagaagcagg aataccataa agaaaaagta
241 agagttgtag ccatggcaca agttgctcga gaaagagtta gagtagctgt taatgaacat
301 ttgaatcaga aaaaatatgc tacacaaaaa ctaattgaag aaaataaaga gacaattcag
361 aacagtttac gacaagtttg gcaaaacaga ttcaactacc ttgaaaaagc tagagagaga
421 aaagctctgt ttctaaaaga aaaatcccaa aaggcttcag agcgtttatt agttcaaaac
481 ttaaataatg agcgcactct tttgaccaga ggactactta aaattgacag actggagaag
541 aatgaggctg tcctaaaaga gaaaagcctg attgttaagc aaaaactaaa agcagaaaaa
601 tatagaaaga atttacttaa agaaatgaaa aaagttagat ctcaagaaat atataaaaga
661 cattgtgaag aaaaatttgt tatggatatg attgcctttg aaaaagcctg tgaaagactt
721 caagatgcta aaacaaaagt agcaattgtg aaaacaaatt tagactttaa agttcccaat
781 ggactgataa aatgaatcaa tgccagatca catcctatga tcatcttaaa ttatagtcat
841 tatttttagt tgaaggaatt tgaaataata ctctaaagca agaaatactc tacatcacaa
901 gatggattta tatataagtc ttctaaaaat ataaagatta gttaaaatgt ttctcttatt
961 ggtcataatt taacttaaag ttgacttagc acctctgaaa aatttcttag atcagatgcc
1021 taaggaacaa ttaaactgat ttaatgtatt gcagacaatg ttgcaatgac attgctgata
1081 ttctgtttca tattctttct aaatatagca attcataagc taatttaggt ttttctggaa
1141 accttagaat agtaatttct actccaactg ctgactttta ttaagacact gtgtacgttg
1201 atgactttta ttacctgctt ttatatattt cctgcttatt ttgttaaaac aatttctgaa
1261 tttatttttt aaagtatggt ttcaatattt tgtcagtgat atatgctgtt ataaaaattc
1321 agaaaatatg aactatgaaa agtaaattaa acattcttat cacctacaaa aaaaaaaaaa
1381 aaaaaaaaaa aaaaaaa
//