LOCUS BC062746 739 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lipocalin 6, mRNA (cDNA clone MGC:72111
IMAGE:6452008), complete cds.
ACCESSION BC062746
VERSION BC062746.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 739)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 739)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: m Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46852170.
FEATURES Location/Qualifiers
source 1..739
/db_xref="H-InvDB:HIT000260637"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:72111 IMAGE:6452008"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_142"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..739
/gene="LCN6"
/gene_synonym="hLcn5"
/gene_synonym="LCN5"
/gene_synonym="UNQ643"
/db_xref="GeneID:158062"
/db_xref="HGNC:HGNC:17337"
/db_xref="MIM:609379"
CDS 47..538
/gene="LCN6"
/gene_synonym="hLcn5"
/gene_synonym="LCN5"
/gene_synonym="UNQ643"
/codon_start=1
/product="lipocalin 6"
/protein_id="AAH62746.1"
/db_xref="GeneID:158062"
/db_xref="HGNC:HGNC:17337"
/db_xref="MIM:609379"
/translation="MGGLLLAAFLALVSVPRAQAVWLGRLDPEQLLGPWYVLAVASRE
KGFAMEKDMKNVVGVVVTLTPENNLRTLSSQHGLGGCDQSVMDLIKRNSGWVFENPSI
GVLELWVLATNFRDYAIIFTQLEFGDEPFNTVELYSLTETASQEAMGLFTKWSRSLGF
LSQ"
BASE COUNT 165 a 204 c 230 g 140 t
ORIGIN
1 ggggactgca catcctgggc ttgcggcgca gtgtagacct gggaggatgg gcggcctgct
61 gctggctgct tttctggctt tggtctcggt gcccagggcc caggccgtgt ggttgggaag
121 actggaccct gagcagcttc ttgggccctg gtacgtgctt gcggtggcct cccgggaaaa
181 gggctttgcc atggagaagg acatgaagaa cgtcgtgggg gtggtggtga ccctcactcc
241 agaaaacaac ctgcggacgc tgtcctctca gcacgggctg ggagggtgtg accagagtgt
301 catggacctg ataaagcgaa actccggatg ggtgtttgag aatccctcaa taggcgtgct
361 ggagctctgg gtgctggcca ccaacttcag agactatgcc atcatcttca ctcagctgga
421 gttcggggac gagcccttca acaccgtgga gctgtacagt ctgactgaga cagccagcca
481 ggaggccatg gggctcttca ccaagtggag caggagcctg ggcttcctgt cacagtagca
541 ggcccagctg cagaaggacc tcacctgtgc tcacaagatc cttctgtgag tgctgcgtcc
601 ccagtaggga tggcgcccac agggtcctgt gacctcggcc agtgtccacc cacctcgctc
661 agcggctccc ggggcccagc accagctcag aataaagcga ttccacacca aaaaaaaaaa
721 aaaaaaaaaa aaaaaaaaa
//