LOCUS BC062729 867 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens ankyrin repeat domain 42, mRNA (cDNA clone
IMAGE:6622286), partial cds.
ACCESSION BC062729
VERSION BC062729.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 867)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 867)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: o Column: 8.
FEATURES Location/Qualifiers
source 1..867
/db_xref="H-InvDB:HIT000260620"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6622286"
/tissue_type="Testis"
/clone_lib="NIH_MGC_82"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..867
/gene="ANKRD42"
/gene_synonym="FLJ37874"
/db_xref="GeneID:338699"
/db_xref="HGNC:HGNC:26752"
CDS <1..778
/gene="ANKRD42"
/gene_synonym="FLJ37874"
/codon_start=2
/product="ANKRD42 protein"
/protein_id="AAH62729.1"
/db_xref="GeneID:338699"
/db_xref="HGNC:HGNC:26752"
/translation="GETLAFPGHVAAFKGDLGMLKKLVEDGVININERADNGSTPMHK
AAGQGHIECLQWLIKMGADSNITNKAGERPSDVAKRFAHLAAVKLLEELQKYDIDDEN
EIDENDVKYFIRHGVEGSTDAKDDLCLSDLDKTDARMRAYKKIVELRHLLEIAESNYK
HLGGITEEDLKQKKEQLESEKTIKELQGQLEYERLRREKLECQLDEYRAEVDQLRETL
EKIQVPNFVAMEDSASCESNKEKRRVKKKVSSGGVFVRRY"
BASE COUNT 332 a 117 c 216 g 202 t
ORIGIN
1 gggggaaact ttagcatttc caggtcatgt ggctgccttt aagggtgatt tggggatgct
61 taagaaatta gtggaagatg gagtaatcaa tattaatgag cgtgctgata atggatcaac
121 tcctatgcat aaagctgctg gacaaggcca catagagtgt ttgcagtggt taattaaaat
181 gggagcagac agtaatatta ccaacaaagc aggggagaga cccagtgatg tggcaaagag
241 gtttgcccat ttggcagcag tgaagctgtt agaggagcta cagaaatatg atatagatga
301 cgaaaatgaa attgatgaaa atgatgtgaa atattttata agacatggtg ttgagggaag
361 cactgatgcc aaggatgatt tatgtctgag tgacttggat aaaacagatg ccagaatgag
421 agcttacaag aaaattgtag aattgagaca cctcctggaa attgccgaga gcaactataa
481 acacttggga ggcataacag aagaagattt aaagcagaag aaagaacagc ttgagtctga
541 aaagaccatc aaagaactgc agggccagct ggagtatgaa cgactacgta gagaaaaatt
601 agaatgtcag cttgatgaat atcgagcaga agttgatcaa ctcagggaaa cactggaaaa
661 aattcaagtc ccaaactttg tggctatgga agacagcgct tcttgtgagt caaacaaaga
721 gaagaggcga gtaaaaaaaa aggtttcttc tggaggggtg tttgtgagaa ggtactaatc
781 agtgaaataa ctaaattgac ctgctagatt tttctctttc attaaaaaaa ttgatacaaa
841 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//