LOCUS BC062659 891 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens potassium large conductance calcium-activated channel,
subfamily M, alpha member 1, mRNA (cDNA clone IMAGE:4277048),
complete cds.
ACCESSION BC062659
VERSION BC062659.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 891)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 891)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: f Column: 17
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..891
/db_xref="H-InvDB:HIT000260550"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4277048"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..891
/gene="KCNMA1"
/gene_synonym="BKTM"
/gene_synonym="KCa1.1"
/gene_synonym="MaxiK"
/gene_synonym="SAKCA"
/gene_synonym="SLO-ALPHA"
/db_xref="GeneID:3778"
/db_xref="MIM:600150"
CDS 173..679
/gene="KCNMA1"
/gene_synonym="BKTM"
/gene_synonym="KCa1.1"
/gene_synonym="MaxiK"
/gene_synonym="SAKCA"
/gene_synonym="SLO-ALPHA"
/codon_start=1
/product="KCNMA1 protein"
/protein_id="AAH62659.1"
/db_xref="GeneID:3778"
/db_xref="MIM:600150"
/translation="MANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSS
SSSSSSSSSSSSSSSSVHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGL
FIILLWRTLKYLWTVCCHCGGKTKATHFGSPEMPPAARSWSGSPPEAAVLRGASSLAL
EVARCRRL"
BASE COUNT 161 a 283 c 276 g 171 t
ORIGIN
1 gggggcgcac agcgccccga gcccaggcgc ctccccgccc ccctcccgcg ctccgcggcg
61 gcggcggcgg cggcagcagt agcagcaata tggctgttga tgggtgtttg gggtggcgct
121 ggcggcggga ggagctcccc cgagcccctg cgccggctgc ccgttgctag ctatggcaaa
181 tggtggcggc ggcggcggcg gcagcagcgg cggcggcggc ggcggcggag gcagcagtct
241 tagaatgagt agcaatatcc acgcgaacca tctcagccta gacgcgtcct cctcctcctc
301 ctcctcctct tcctcttctt cttcttcctc ctcctcttcc tcctcgtcct cggtccacga
361 gcccaagatg gatgcgctca tcatcccggt gaccatggag gtgccgtgcg acagccgggg
421 ccaacgcatg tggtgggctt tcctggcctc ctccatggtg actttcttcg ggggcctctt
481 catcatcttg ctctggcgga cgctcaagta cctgtggacc gtgtgctgcc actgcggggg
541 caagacgaag gccacccact ttgggtcccc ggaaatgcca ccagcagcgc ggagctggag
601 cgggagtccg cctgaggccg cggttttacg cggagcgtct tccctggcgc tcgaggtggc
661 tagatgtcgt cggctttagc tattcctggt gcagacgccc accggcactg aggctggcga
721 caccttcgat gtatggttgc taggctcact gcctggtctg tagtcgtgtc cctagagatg
781 tcttcccttc cccacagcca ctggctggag tgggggaccc cgacactgat agaaaactgc
841 agaataaaaa agaaagaact ggaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//