LOCUS BC062555 2085 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glutamic pyruvate transaminase (alanine
aminotransferase) 2, mRNA (cDNA clone MGC:71171 IMAGE:6429257),
complete cds.
ACCESSION BC062555
VERSION BC062555.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2085)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2085)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: n Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19263339.
FEATURES Location/Qualifiers
source 1..2085
/db_xref="H-InvDB:HIT000260467"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71171 IMAGE:6429257"
/tissue_type="Lung, epidermoid carcinoma"
/clone_lib="NIH_MGC_101"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..2085
/gene="GPT2"
/gene_synonym="ALT2"
/db_xref="GeneID:84706"
/db_xref="HGNC:HGNC:18062"
/db_xref="MIM:607438"
CDS 60..1631
/gene="GPT2"
/gene_synonym="ALT2"
/codon_start=1
/product="glutamic pyruvate transaminase (alanine
aminotransferase) 2"
/protein_id="AAH62555.1"
/db_xref="GeneID:84706"
/db_xref="HGNC:HGNC:18062"
/db_xref="MIM:607438"
/translation="MQRAAALVRRGCGPRTPSSWGRSQSSAAAEASAVLKVRPERSRR
ERILTLESMNPQVKAVEYAVRGPIVLKAGEIELELQRGIKKPFTEVIRANIGDAQAMG
QQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIR
EDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPL
YSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQV
QSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELA
SFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPP
VAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAK
AVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVL
QKVKDFHINFLEKYA"
BASE COUNT 463 a 584 c 623 g 415 t
ORIGIN
1 ctaaccgagt gcggcgaggg cctaccaggg gcgacagggt ttctctccgc aagcgcgcga
61 tgcagcgggc ggcggcgctg gtccggcggg gctgtggtcc ccggaccccc agctcctggg
121 gccgcagcca gagcagcgcg gccgccgagg cctcggcggt gctcaaggtg cggcccgagc
181 gcagccggcg cgagcgcatc ctcacgctgg agtccatgaa cccgcaggtg aaggcggtgg
241 agtacgccgt gcggggaccc atcgtgctca aggccggcga gatcgagctc gagctgcagc
301 ggggtatcaa aaagccattc acagaggtca tccgagccaa catcggggac gcccaggcta
361 tggggcagca gccaatcacc ttcctccggc aggtgatggc actatgcacc tacccaaacc
421 tgctggacag ccccagcttc ccagaagatg ctaagaaacg tgcccggcgg atcctgcagg
481 cttgtggcgg gaacagcctg gggtcctaca gtgctagcca gggtgtcaac tgcatccgtg
541 aagatgtggc tgcctacatc accaggaggg atggcggtgt gcctgcggac cccgacaaca
601 tctacctgac cacgggagct agtgacggca tttctacgat cctgaagatc ctcgtctccg
661 ggggcggcaa gtcacggaca ggtgtgatga tccccatccc acaatatccc ctctattcag
721 ctgtcatctc tgagctcgac gccatccagg tgaattacta cctggacgag gagaactgct
781 gggcgctgaa tgtgaatgag ctccggcggg cggtgcagga ggccaaagac cactgtgatc
841 ctaaggtgct ctgcataatc aaccctggga accccacagg ccaggtacaa agcagaaagt
901 gcatagaaga tgtgatccac tttgcctggg aagagaagct ctttctcctg gctgatgagg
961 tgtaccagga caacgtgtac tctccagatt gcagattcca ctccttcaag aaggtgctgt
1021 acgagatggg gcccgagtac tccagcaacg tggagctcgc ctccttccac tccacctcca
1081 agggctacat gggcgagtgt ggttacagag gaggctacat ggaggtgatc aacctgcacc
1141 ctgagatcaa gggccagctg gtgaagctgc tgtcggtgcg cctgtgcccc ccagtgtctg
1201 ggcaggccgc catggacatt gtcgtgaacc ccccggtggc aggagaggag tcctttgagc
1261 aattcagccg agagaaggag tcggtcctgg gtaatctggc caaaaaagca aagctgacgg
1321 aagacctgtt taaccaagtc ccaggaattc actgcaaccc cttgcagggg gccatgtacg
1381 ccttccctcg gatcttcatt cctgccaaag ctgtggaggc tgctcaggcc catcaaatgg
1441 ctccagacat gttctactgc atgaagctcc tggaggagac tggcatctgt gtcgtgcccg
1501 gcagtggctt tgggcagagg gaaggcactt accacttcag gatgactatc ctccctccag
1561 tggagaagct gaaaacggtg ctgcagaagg tgaaagactt ccacatcaac ttcctggaga
1621 agtacgcgtg aggacgcctg agccccagcg ggagacctgt ccttggctct tcctcccaat
1681 gcccgtcagg ctgaactcgc ctcccccgtg actctgcctc gggcctcgca gaggccgctg
1741 gtcacttcgt catcattttg cccctggaga cgtctttctt tgtgccttga tgttgagagc
1801 gcctctcttt tgagcaaaca agcattctat atgcaaccag agtagagggg acctgctcag
1861 caggtgtgac cagggttctc tgaatctgtt attgtttttg cttctggaaa gttcatttgg
1921 ggtttacaac aactaggatg tgttgggtga gatgtttcag atctggagaa atgagcaggt
1981 gtcgggaaat gtgtgactta accgtggtga gggctggaaa tccaaactca ccaccatgat
2041 ctgtgaaata aagcccttag cggtgtgaaa aaaaaaaaaa aaaaa
//