LOCUS BC062476 1478 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens alcohol dehydrogenase 1C (class I), gamma polypeptide,
mRNA (cDNA clone MGC:75464 IMAGE:30408761), complete cds.
ACCESSION BC062476
VERSION BC062476.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1478)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1478)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: p Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34577060.
FEATURES Location/Qualifiers
source 1..1478
/db_xref="H-InvDB:HIT000260439"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75464 IMAGE:30408761"
/tissue_type="White Matter pool- 5 brain tissues- femoral
artery, olfactory tract, optic tract, cerebellar white
matter, cerebral white matter."
/clone_lib="NIH_MGC_181"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1478
/gene="ADH1C"
/db_xref="GeneID:126"
/db_xref="HGNC:HGNC:251"
/db_xref="MIM:103730"
CDS 67..1194
/gene="ADH1C"
/codon_start=1
/product="alcohol dehydrogenase 1C (class I), gamma
polypeptide"
/protein_id="AAH62476.1"
/db_xref="GeneID:126"
/db_xref="HGNC:HGNC:251"
/db_xref="MIM:103730"
/translation="MSTAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAA
GICRSDEHVVSGNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCR
ICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAK
IDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAA
RIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTM
MASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVA
DFMAKKFSLDALITNVLPFEKINEGFDLLRSGKSIRTVLTF"
BASE COUNT 443 a 313 c 354 g 368 t
ORIGIN
1 ctcaagcaga gaagaaatcc acaagtactc accagcctcc tggtctgcag agaagacaga
61 atcaatatga gcacagcagg aaaagtaatc aaatgcaaag cagctgtgct atgggagtta
121 aagaaaccct tttccattga ggaggtagag gttgcacctc ctaaggctca tgaagttcgc
181 attaagatgg tggctgcagg aatctgtcgt tcagatgagc atgtggttag tggcaacctg
241 gtgacccccc ttcctgtgat tttaggccat gaggcagccg gcatcgtgga aagtgttgga
301 gaaggggtga ctacagtcaa accaggtgat aaagtcatcc cgctctttac tcctcagtgt
361 ggaaaatgca gaatttgcaa aaacccagaa agcaactact gcttgaaaaa tgatctaggc
421 aatcctcggg ggaccctgca ggatggcacc aggaggttca cctgcagcgg gaagcccatc
481 caccacttcg tcggcgtcag caccttctcc cagtacacag tggtggatga gaatgcagta
541 gccaaaattg atgcagcctc gcccctggag aaagtctgcc tcattggctg tggattttcg
601 actggttatg ggtctgcagt caaagttgcc aaggtcaccc cagggtctac ctgtgctgtg
661 tttggcctgg gaggggtcgg cctatctgtt gttatgggct gtaaagcagc tggagcagcc
721 agaatcattg ctgtggacat caacaaggac aaatttgcaa aggctaaaga gttgggtgcc
781 actgaatgca tcaaccctca agactacaag aaacccattc aggaagtgct aaaggaaatg
841 actgatggag gtgtggattt ttcgtttgaa gtcatcggtc agcttgacac catgatggct
901 tccctgttat gttgtcatga ggcatgtggc acaagtgtca ttgtaggggt acctcctgat
961 tcccagaacc tctcaataaa ccctatgctg ctactgactg gacgcacgtg gaaaggagct
1021 atttttggag gctttaagag taaagaatct gtccccaaac ttgtggctga ctttatggct
1081 aagaagtttt cactggatgc attaataaca aatgttttac cttttgaaaa aataaatgaa
1141 ggatttgacc tgcttcgctc tggaaagagt atccgtaccg tcctgacgtt ttgaaacaat
1201 acagatgcct tcccttgtag cagttttcag cctcctctac cctacatgat ctggagcaac
1261 agctaggaaa tatcattaat tctgctcttc agagatgtta aaaataaatt acacgtggga
1321 gctttccaaa gaaatggaaa ttgatgggaa attatttgtc aagcaaatgt ttaaaatcca
1381 aatgagaact aaataaagtg ttgaacatca actggggaat tgaagccaat aaaccttcct
1441 tcttaaccat tcaaaaaaaa aaaaaaaaaa aaaaaaaa
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