LOCUS BC062432 1043 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens oral-facial-digital syndrome 1, mRNA (cDNA clone
IMAGE:6495872), partial cds.
ACCESSION BC062432
VERSION BC062432.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1043)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1043)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (17-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: m Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4503178.
FEATURES Location/Qualifiers
source 1..1043
/db_xref="H-InvDB:HIT000260395"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6495872"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_142"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1043
/gene="OFD1"
/gene_synonym="71-7A"
/gene_synonym="CXorf5"
/db_xref="GeneID:8481"
/db_xref="MIM:300170"
CDS 330..>1043
/gene="OFD1"
/gene_synonym="71-7A"
/gene_synonym="CXorf5"
/codon_start=1
/product="OFD1 protein"
/protein_id="AAH62432.1"
/db_xref="GeneID:8481"
/db_xref="MIM:300170"
/translation="MMAQSNMFTVADVLSQDELRKKLYQTFKDRGILDTLKTQLRNQL
IHELMHPVLSGELQPRSISVEGSSLLIGASNSLVADHLQRCGYEYSLSVFFPESGLAK
EKVFTMQDLLQLIKINPTSSLYKSLVSGSDKENQKGFLMHFLKELAEYHQAKESCNME
TQTSSTFNRDSLAEKLQLIDDQFADAYPQRIKFESLEIKLNEYKREIEEQLRAEMCQK
LKFFKDTEIAKKKKKKKKKK"
BASE COUNT 305 a 228 c 256 g 254 t
ORIGIN
1 gggggactgg ctgtgaggcg gtcctgcctc gctgccttca gtccctagtg tctgggtccc
61 cgccctccag ccgcctttga gtcgtgcctg ggtcctcgcc cttgcctcag aaccgcgaag
121 aaaggaagct cgcgtgtttg ctagaaaacc tagttgggag tgcgaggcag agaacgttca
181 gcacctttgt tcctcccgaa ccctcgggac agaggcaggg ttctgagggc agggattccc
241 cctcgtcttg gccccaccgc ccgggctggg cactaaactc gggccgcggc ggggcgagcg
301 aggcgggctc cggagggagc tgacgcctga tgatggcgca gtccaacatg tttaccgtgg
361 ctgatgtgtt gagtcaagat gaactgcgca aaaagctata ccagacgttt aaggatcggg
421 gtatactgga tacactcaag acacaacttc gaaaccagct aattcatgag ttgatgcacc
481 ctgtattgag tggagaactg cagcctcggt ccatttcagt agaagggagc tccctcttaa
541 taggcgcctc taactcttta gtggcagatc acttacaaag atgtggctat gaatattcac
601 tttctgtttt ctttccagaa agtggtttgg caaaagaaaa ggtatttact atgcaggatc
661 tattacaact cattaaaatc aaccctactt ccagtctcta caaatcactg gtttcaggat
721 ctgataaaga aaatcaaaaa ggttttctta tgcatttttt aaaagaattg gcagaatatc
781 atcaagctaa agagagttgt aatatggaaa ctcagacaag ttcgacattt aacagagatt
841 ctctggctga gaagcttcag cttattgatg atcagtttgc agatgcttac cctcagcgta
901 tcaagttcga atctttagaa ataaagctaa atgagtataa gagagaaata gaagagcaac
961 ttcgggcaga aatgtgtcaa aagttgaagt tttttaaaga taccgagata gcaaaaaaaa
1021 aaaaaaaaaa aaaaaaaaaa aaa
//