LOCUS BC062346 1174 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ankyrin repeat domain 16, mRNA (cDNA clone MGC:71345
IMAGE:3845142), complete cds.
ACCESSION BC062346
VERSION BC062346.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1174)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1174)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: b Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58331116.
FEATURES Location/Qualifiers
source 1..1174
/db_xref="H-InvDB:HIT000260346"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71345 IMAGE:3845142"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1174
/gene="ANKRD16"
/db_xref="GeneID:54522"
/db_xref="HGNC:HGNC:23471"
CDS 30..1115
/gene="ANKRD16"
/codon_start=1
/product="ankyrin repeat domain 16"
/protein_id="AAH62346.1"
/db_xref="GeneID:54522"
/db_xref="HGNC:HGNC:23471"
/translation="MAQPGDPRRLCRLVQEGRLRALKEELQAAGGCPGPAGDTLLHCA
ARHGHRDVLAYLAEAWGMDIEATNRDYKRPLHEAASMGHRDCVRYLLGRGAAVDCLKK
ADWTPLMMACTRKNLGVIQELVEHGANPLLKNKDGWNSFHIASREGDPLILQYLLTVC
PGAWKTESKIRRTPLHTAAMHGHLEAVKVLLKRCQYEPDYRDNCGVTALMDAIQCGHI
DVARLLLDEHGACLSAEDSLGAQALHRAAVTGQDEAIRFLVSELGVDVDVRATSTHLT
ALHYAAKEGHTSTIQTLLSLGADINSKDEKNRSALHLACAGQHLACAKFLLQSGLKDS
EDITGTLAQQLPRRADVLQGSGHSAMT"
BASE COUNT 279 a 336 c 352 g 207 t
ORIGIN
1 ccccgcgcag cccggcccga cccgcggcga tggcccagcc cggggacccg cggcgcctct
61 gcaggctggt gcaggagggc cggctgcgcg ccctgaagga ggagctgcag gcggccgggg
121 gctgcccggg gccggccggg gataccctcc tgcactgcgc cgcgcgccac gggcatcggg
181 acgtgctggc ctatctggcc gaggcctggg gcatggacat cgaggccacc aaccgagact
241 acaagcggcc tctgcacgag gcggcctcca tgggccaccg agactgcgtg cgctacctgc
301 tgggccgggg ggcagcggtc gactgcctga agaaggccga ctggactcct ctgatgatgg
361 cctgcacaag gaagaacctg ggggtgatcc aggagctggt ggaacatggc gccaatccac
421 tcctgaagaa caaagatggc tggaacagtt tccacattgc cagtcgagaa ggcgaccctc
481 tgatcctcca gtacctgctc actgtttgcc caggtgcctg gaagacagag agcaaaatta
541 gaaggactcc tctgcatact gcagcaatgc atggccattt ggaggcagtc aaggtgcttc
601 ttaagaggtg ccaatatgaa ccagactaca gagacaactg tggcgtcacc gccttgatgg
661 acgcaatcca gtgtgggcac atcgacgtcg ctaggctgct cctcgatgaa catggggctt
721 gcctttcagc agaagacagc ctgggtgccc aggctctgca cagggcagct gtcacagggc
781 aggacgaagc catccgattc ttggtctctg aacttggcgt cgatgtagat gtgagagcca
841 catcaaccca cctcacagca cttcattatg cagctaagga aggacataca agtacaattc
901 agactctctt atccttggga gctgacatca attctaaaga tgaaaaaaat cgatcagccc
961 tgcatctggc ctgtgcaggt cagcacttgg cctgtgccaa gtttctcctg cagtcgggac
1021 tgaaggattc tgaagacatc acgggcaccc tggctcagca gctcccaagg agagcagatg
1081 tccttcaggg ctctggccat agcgcaatga cataaggatg tttccaagag gaggcaataa
1141 agtgcatggt aattcaaaaa aaaaaaaaaa aaaa
//