LOCUS BC061926 708 bp mRNA linear HUM 24-FEB-2004
DEFINITION Homo sapiens caldesmon 1, mRNA (cDNA clone IMAGE:5539489), partial
cds.
ACCESSION BC061926
VERSION BC061926.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 708)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 708)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (10-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: a Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15149462.
FEATURES Location/Qualifiers
source 1..708
/db_xref="H-InvDB:HIT000260277"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5539489"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>708
/gene="CALD1"
/gene_synonym="CDM"
/gene_synonym="MGC21352"
/gene_synonym="NAG22"
/db_xref="GeneID:800"
/db_xref="MIM:114213"
CDS 168..>708
/gene="CALD1"
/gene_synonym="CDM"
/gene_synonym="MGC21352"
/gene_synonym="NAG22"
/codon_start=1
/product="CALD1 protein"
/protein_id="AAH61926.1"
/db_xref="GeneID:800"
/db_xref="MIM:114213"
/translation="MLGGSGSHGRRSLAALSQIAYQRNDDDEEEAARERRRRARQERL
RQKQEEESLGQVTDQVEVNAQNSVPDEEAKTTTTNTQVEGDDEAAFLERLARREERRQ
KRLQEALERQKEFDPTITDASLSLPSRRMQNDTAENETTEKEEKSESRQERYEIEETE
TVTKSYQKNDWRDAEEKKKK"
misc_feature 219..707
/gene="CALD1"
/gene_synonym="CDM"
/gene_synonym="MGC21352"
/gene_synonym="NAG22"
/note="Caldesmon; Region: Caldesmon"
/db_xref="CDD:pfam02029"
BASE COUNT 221 a 193 c 207 g 87 t
ORIGIN
1 ggacagacca acgtgttaac acaaagggag aacacgggag catcctgcac cgtgcatttc
61 agccacagat cacatggccc ctccgcgggc ccagcccacg ccctgaccgc ccggcctggc
121 caggtctccg tatctctctg ccccgccgcc ccttcccaac tgcggacatg ctgggtggat
181 ccggatcgca tggaagacgc agcctggccg cgctctccca aatcgcctac cagaggaatg
241 acgatgatga agaggaggca gcccgggaac ggcgccgccg agcccgacag gaacggctgc
301 ggcagaagca ggaggaagaa tccttgggac aggtgaccga ccaggtggag gtgaatgccc
361 agaacagtgt gcctgacgag gaggccaaga caaccaccac aaacactcaa gtggaagggg
421 atgatgaggc cgcattcctg gagcgcctgg ctcggcgtga ggaaagacgc caaaaacgcc
481 ttcaggaggc tctggagcgg cagaaggagt tcgacccaac aataacagat gcaagtctgt
541 cgctcccaag cagaagaatg caaaatgaca cagcagaaaa tgaaactacc gagaaggaag
601 aaaaaagtga aagtcgccaa gaaagatacg agatagagga aacagaaaca gtcaccaagt
661 cctaccagaa gaatgattgg agggatgctg aagaaaaaaa aaaaaaaa
//