LOCUS BC061583 1140 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2Q family member 1, mRNA
(cDNA clone IMAGE:6504049), partial cds.
ACCESSION BC061583
VERSION BC061583.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1140)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1140)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: j Column: 2.
FEATURES Location/Qualifiers
source 1..1140
/db_xref="H-InvDB:HIT000260205"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6504049"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1140
/gene="UBE2Q1"
/gene_synonym="GTAP"
/gene_synonym="NICE-5"
/gene_synonym="PRO3094"
/db_xref="GeneID:55585"
/db_xref="HGNC:HGNC:15698"
CDS <1..672
/gene="UBE2Q1"
/gene_synonym="GTAP"
/gene_synonym="NICE-5"
/gene_synonym="PRO3094"
/codon_start=1
/product="UBE2Q1 protein"
/protein_id="AAH61583.1"
/db_xref="GeneID:55585"
/db_xref="HGNC:HGNC:15698"
/translation="PTRPYEMKEEEPAEGKKSEDDGIGKENLAILEKIKKNQRQDYLN
GAVSGSVQATDRLMKELRDIYRSQSFKGGNYAVELVNDSLYDWNVKLLKVDQDSALHN
DLQILKEKEGADFILLNFSFKDNFPFDPPFVRVVSPVLSGGYVLGGGAICMELLTKQG
WSSAYSIESVIMQISATLVKGKARVQFGANKSQYSLTRAQQSYKSLVQIHEKNGWYTP
PKEDG"
BASE COUNT 343 a 263 c 248 g 286 t
ORIGIN
1 cccacgcgtc cgtatgaaat gaaagaggaa gagccagctg agggcaagaa atctgaagat
61 gatggcattg gaaaagaaaa cttggccatc ctagagaaaa ttaaaaagaa ccagaggcaa
121 gattacttaa atggtgcagt gtctggctcg gtgcaggcca ctgaccggct gatgaaggag
181 ctcagggata tataccgatc acagagtttc aaaggcggaa actatgcagt cgaactcgtg
241 aatgacagtc tgtatgattg gaatgtcaaa ctcctcaaag ttgaccagga cagcgctttg
301 cacaacgatc tccagatcct caaagagaaa gaaggagccg acttcattct acttaacttt
361 tcctttaaag ataactttcc ctttgaccca ccatttgtca gggttgtgtc tccagtcctc
421 tctggagggt atgttctggg cggaggggcc atctgcatgg aacttctcac caaacagggc
481 tggagcagtg cctactccat agagtcagtg atcatgcaga tcagtgccac actggtgaag
541 gggaaagcac gagtgcagtt tggagccaac aaatctcaat acagtctgac aagagcacag
601 cagtcctaca agtccttggt gcagatccac gaaaaaaacg gctggtacac acccccaaaa
661 gaagacggct aaccctggag tatcaccctt cctccctccc caggcaccac tggaccaatt
721 acctttgaat gctgtatttg gatctcacgc tgcctctgtg gttccctccc tcatttttcc
781 tggacgtgat agctctgcct attgcaggac aatgatggct attctaaacg ctaaggaaaa
841 aaaacaaaca cagaactgtt tcaagtactc aagactgact tacagaccaa ccaaccacct
901 tgctggaacc cttgctagca ggcattctta taaaagaaac tttcgagcct ccttatattg
961 ctggaaactc agctgtgctc cagactagag cctccttacc tatgctatgg atttttaatt
1021 tattttctct tatttcatgt acactgcttt ttttggttac agtgtatgat ggatgtgtat
1081 gaaaaaaatg tatctttggg aaaacaatta cagtttgtta atttgaaaaa aaaaaaaaaa
//