LOCUS BC060847 3655 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens par-6 partitioning defective 6 homolog beta (C.
elegans), mRNA (cDNA clone MGC:71759 IMAGE:30345080), complete cds.
ACCESSION BC060847
VERSION BC060847.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3655)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3655)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: h Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62955041.
FEATURES Location/Qualifiers
source 1..3655
/db_xref="H-InvDB:HIT000260149"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71759 IMAGE:30345080"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3655
/gene="PARD6B"
/gene_synonym="PAR6B"
/db_xref="GeneID:84612"
/db_xref="HGNC:HGNC:16245"
/db_xref="IMGT/GENE-DB:16245"
/db_xref="MIM:608975"
CDS 244..1362
/gene="PARD6B"
/gene_synonym="PAR6B"
/codon_start=1
/product="PARD6B protein"
/protein_id="AAH60847.1"
/db_xref="GeneID:84612"
/db_xref="HGNC:HGNC:16245"
/db_xref="IMGT/GENE-DB:16245"
/db_xref="MIM:608975"
/translation="MNRSHRHGAGSGCLGTMEVKSKFGAEFRRFSLERSKPGKFEEFY
GLLQHVHKIPNVDVLVGYADIHGDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYS
AFGTDTLIKKKNVLTNVLRPDNHRKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRL
YKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEV
NGIEVSGKSLDQVTDMMIANSRNLIITVRPANQRNNVVRNSRTSGSSGQSTDNSLLGY
PQQIEPSFEPEDEDSEEDDIIIEDNGVPQQIPKAVPNTESLESLTQIELSFESGQNGF
IPSNEVSLAAIASSSNTEFETHAPDQKLLEEDGTIITL"
BASE COUNT 1090 a 676 c 749 g 1140 t
ORIGIN
1 gagggaggga gctgcttccc cgcctgccgc gccaccagtc cgaccctcgg tcccgccgtg
61 tgagcagctg gtggagtgga gctcagcgcg gacgccggag ctgcggccgc cccctctgca
121 ggtgcctgtg aggaggcgcc cgggccgcaa ccgctttccg agatccccag tcgcgcactc
181 gctccccgcg ctcctgaggg gccgcccggc cggaggaggc cgtcgcgggg ctcggcgttc
241 agcatgaacc gcagccaccg gcacggggcg ggcagcggct gcctgggcac tatggaggtg
301 aagagcaagt ttggagctga atttcgtcgg ttttcgctgg aaagatcaaa acctggaaaa
361 tttgaggagt tttatggatt actacaacat gttcataaga tccccaatgt tgacgttttg
421 gtaggctatg cagacatcca tggagactta ctacctataa ataatgatga taattatcac
481 aaagctgttt caacggccaa tccactgctt aggatattta tacaaaagaa ggaagaagca
541 gactacagtg cctttggtac agacacgcta ataaagaaga agaatgtttt aaccaacgta
601 ttgcgtcctg acaaccatag aaaaaagcca catatagtca ttagtatgcc ccaagacttt
661 agacctgtgt cttctattat agacgtggat attctcccag aaacgcatcg tagggtacgt
721 ctttacaaat acggcacgga gaaaccccta ggattctaca tccgggatgg ctccagtgtc
781 agggtaacac cacatggctt agaaaaggtt ccagggatct ttatatccag gcttgtccca
841 ggaggtctgg ctcaaagtac aggactatta gctgttaatg atgaagtttt agaagttaat
901 ggcatagaag tttcagggaa gagccttgat caagtaacag acatgatgat tgcaaatagc
961 cgtaacctca tcataacagt gagaccggca aaccagagga ataatgttgt gaggaacagt
1021 cggacttctg gcagttccgg tcagtctact gataacagcc ttcttggcta cccacagcag
1081 attgaaccaa gctttgagcc agaggatgaa gacagcgaag aagatgacat tatcattgaa
1141 gacaatggag tgccacagca gattccaaaa gctgttccta atactgagag cctggagtca
1201 ttaacacaga tagagttaag ctttgagtct ggacagaatg gctttattcc ctctaatgaa
1261 gtgagcttag cagccatagc aagcagctca aacacggaat ttgaaacaca tgctccagat
1321 caaaaactct tagaagaaga tggaacaatc ataacattat gaaaccgtgg tttgaatgtt
1381 ttcagagtga ggatgccatg aggacttgta catttggcta gtttaaaagc atatatacct
1441 ctgaccagtg acgtggaata ggcatgagac gagtaacgtt gcaagcttac aatattatta
1501 aagtagtagt ttgataattg ttaatataaa ctttggtgga tcagaggtga atttaagtcc
1561 aaaacaaagg ggctttgctg atgaagttac gtgcttttgc tgttttgtct gtggagaatc
1621 agatgttaaa gcacattctt ggaactatgt gagaagacta gatcatttct gttggaagtg
1681 gttgcatatt taacctgctg tgcagagccc agttaatttt tcctttaact gtatttttaa
1741 aattctaatg tgaagtctga ttctctcttg tggtacattg gggacctcag ctcttaaagg
1801 tctcatgttc ccaatatttt attttgattt tttttttttt tttttagtga ctgggtctca
1861 ctctgttgcc cacactggaa tgcagtgaat catgattgta tcactgcact ccagcttggg
1921 taacagagtg agaccgtttc taaaaattaa aaaaaaaaaa aaaaggcagc tggatgcagt
1981 ggctagcacc tgtaatccca gctacttggg aggctgatcc gcccatctcc tcccaaagtg
2041 ctggattgca ggcatgagcg cctagccagg aagctatctt ttcttgagtt atgaaacttt
2101 gcaacagttg ttcaaattgg tgtttgtcct tcctatagct ttcatatttt caaattaatt
2161 ctgtatggct atataattta tgttttaaaa ggcaattctc ttgactttgg aaatatggaa
2221 gtctctcctt taacctattc ttgttcccat tcccagtctc atttgaaatc attcctttta
2281 ttgttagtgt gtgtattttt gttggtgtgc ttttaatgca tccaagtatg catcattttg
2341 gataaaaaat acatccaaat taagatgttt taacacatag gacaaacttg tgcacttttt
2401 atgccaaaaa aaaaaaaatt gggttttcct tcatgggatt tctagaaaca ctgcctacac
2461 tttatgaaaa ctacatagta ttcacctgtg acaggtagag tttgtcacta ttaattttat
2521 gaggctattt attactttcc agtgcatcca cttagaacaa gctaagagta aggctgctaa
2581 ctttaattcc ttgcctgatt ttattgtaca gtgcacaagc acaatggtat gcttgtatat
2641 agaaactaaa aatactatga agtacataag ttccctatgg cttatggaga gttatttatt
2701 aattaacttt atggtagggc tagtatgaat acctttttaa caattgtgtg ctattacaac
2761 aatgaagatt caaatgactc cgctttgaag gatgttttct ctatatggta aaatatatat
2821 gaagaagtct tgattacgtg aagatcactt gactcagaat acttcaatgt attttgttca
2881 cattaccact aagcatatta tcagtaaact attaactgac tgcacattat gtaatacgtt
2941 gtactttttg ttgaattcac cgaagttctt ccatttatat actattttta atggcattcc
3001 ggctttaaca ttctgtgagt cttataaatt tgactcttga atggcaaaat aatgttagta
3061 tgtagaaggt taactttcat ttataatata agtggtgcag gggttcaaca ttttaagtaa
3121 aaatattttt acacactacc tctctttttt tttttttaaa gttttaacat cagaactttt
3181 gggggaaaaa ctacttcagg gcttgacttt ttgtacaaat tttaactgta aaatacagat
3241 ttatcttgta cgcattcatg gaaatggaaa tcaaagctgc tattgctttt tattttaatt
3301 atcctgttaa gggtatctat caatggtatt ttcaagtaga tctctgtttc ttaaattatt
3361 ggtgaaataa ttgattacta gatatattgt aaaaccaata gatcctggtt atacgataaa
3421 atatcagctc attggtaggc tgaatcaatt atttcaagtg caccttatta acaaaagtat
3481 cagtggatcc aacataaaat tttatagtac taaatgtcaa gcctaactgt gaattttgtt
3541 ctgtatctta agtaaattta tgataatgtt ctcgagctat caacaaaata tatgtacttt
3601 tgtgagctat gaattttcta attaaatttt acatgctata aaaaaaaaaa aaaaa
//