LOCUS BC060814 2184 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ArfGAP with GTPase domain, ankyrin repeat and PH
domain 1, mRNA (cDNA clone IMAGE:30333116), complete cds.
ACCESSION BC060814
VERSION BC060814.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2184)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2184)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: b Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281554
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2184
/db_xref="H-InvDB:HIT000260116"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30333116"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2184
/gene="AGAP1"
/gene_synonym="GGAP1"
/db_xref="GeneID:116987"
/db_xref="HGNC:HGNC:16922"
/db_xref="MIM:608651"
CDS 599..1777
/gene="AGAP1"
/gene_synonym="GGAP1"
/codon_start=1
/product="AGAP1 protein"
/protein_id="AAH60814.1"
/db_xref="GeneID:116987"
/db_xref="HGNC:HGNC:16922"
/db_xref="MIM:608651"
/translation="MNYQQQLANSAAIRAEIQRFESVHPNIYSIYELLERVEEPVLQN
QIREHVIAIEDAFVNSQEWTLSRSVPELKVGIVGNLASGKSALVHRYLTGTYVQEESP
EGGRFKKEIVVDGQSYLLLIRDEGGPPEAQFAMWVDAVIFVFSLEGEISFQTVYHYYS
RMANYRNTSEIPLVLVGTQDAISSANPRVIDDARARKLSNDLKRCTYYETCATYGLNV
ERVFQDVAQKIVATRKKQQLSIGPCKSLPNSPSHSSVCSAQVSAVHISQTSNGGGSLS
DYSSSVPSTPSTSQKELRIDVPPTANTPTPVRKQSKRRSNLFTSRKGSDPDKEKKGLE
SRADSIGSGRAIPIKQGLPFFVLALTASTYLRPAGARARQSSPWPGRAEGWSDQPALC
"
BASE COUNT 444 a 678 c 683 g 379 t
ORIGIN
1 ggggctcgga gcgggctccg cggcttgcaa ggcgcctgcg actcggtccc aggtcggcgg
61 gcggcgcacg gcgggctcgc gcgggggccc cggcgcgccg ggcggcgcag tacgcagcgc
121 gcggacccac gccacggcca ggagcccaga gcagcgcggc cacactgccc aggggtcggc
181 cctcggcccc ggcgctcgga gcgcggcggc tgcctgggct ttaatggctg ctccgcggag
241 cagcgcctag ggctggaagg cggctgcggc tcaggaagtc acccgagcaa gcctccttcg
301 gggccggccg cacccgccgc ggcgcgctcc atgggggcgc gctccccccg ggcggcccgc
361 tgacccggga cgccggggcc cgctcgctcg ccggccgcgc gtcccggcca tgaactgagc
421 ccgcgggcca gccccgcgcc tgctccgccc gcgcctttct tctcgcgcct cctccgcccg
481 ccgccggcgg gcccggctcc ccgggggctg cggcgccccg ggctcggcgg cccgcgggcc
541 ccggggcgcg gggcggcggc ggcggggggc gcgcggctcc gggcgcggcg cctgcaccat
601 gaactaccag cagcagctgg ccaactcggc tgccatccgg gccgagatcc agcgcttcga
661 gtcggtccac cccaacatct actccatcta cgagctgctg gagcgcgtgg aggagccggt
721 gctgcagaac cagatccggg agcacgtcat cgccatcgaa gatgccttcg tgaacagcca
781 ggaatggacg ctgagtcgat ctgtcccgga gctcaaagtg ggaattgtgg gtaacttggc
841 cagcggcaag tctgccctgg tgcaccggta cctgacgggc acatatgtcc aggaggagtc
901 tccggaaggt ggcaggttca agaaagagat tgtcgttgat ggacagagct atctgctgct
961 gatcagagat gaagggggcc ccccggaggc gcagtttgcc atgtgggtgg acgctgttat
1021 atttgtcttc agcttggagg gtgaaataag tttccagacc gtttaccact actacagtcg
1081 aatggccaac tatcggaaca cgagcgagat tcctctggtt ctggtgggaa cccaggatgc
1141 cataagttct gctaacccga gggtcatcga tgacgccagg gcgaggaagc tctccaacga
1201 cctgaaacgg tgcacgtact acgagacgtg tgctacatac gggctgaatg tggagagggt
1261 cttccaggac gttgcccaga agattgttgc cacaaggaag aagcagcagc tgtccatagg
1321 accctgcaag tcgctaccta attctcccag ccattcctcc gtctgttccg cgcaggtgtc
1381 tgccgtgcac atcagccaga caagtaatgg aggtgggagt ttaagcgact attcctcctc
1441 cgttccatcg actcccagca ccagccagaa ggaacttcgg atcgatgttc ctcccactgc
1501 caacacgccc acgcccgttc gcaagcagtc taagcgccgg tccaacctgt tcacctctcg
1561 gaaagggagc gacccagaca aagagaagaa aggcctggag agtcgtgcgg acagcattgg
1621 gagcggccga gccatcccaa ttaaacaggg cctgcccttc tttgtccttg cactgacagc
1681 cagcacttat ctcaggcctg ctggagcccg tgcccgtcag tcctccccct ggccaggcag
1741 ggccgagggg tggtcagacc agcccgcatt gtgctgaagg cccacaatca gcccagctgt
1801 ccggggccat gatgaattag cggtgggagt taacatagag gtgaactcca gatcggccga
1861 tagcttgcag gccgctgctg tttgtcctga cttcagcgca tctctgatag acctttgaca
1921 ccttccaaca aagaggttac aggagggaga gctggagaaa tggagcgctc ctccagaaag
1981 ttcggcaact cacaaaagac cccttaattt ctatagcggg caattcagtc cacaaaggaa
2041 ggaaatcaat gagcgtttac gctctttctt tgaggaacct ttttttaaag aaaaaaacat
2101 ttactggcgc tttgcatgtt ttgggtacaa gcagtggtag aaacataaaa cattaaaatc
2161 caagattgaa aaaaaaaaaa aaaa
//