LOCUS BC060780 4315 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens alpha-kinase 1, mRNA (cDNA clone IMAGE:30339169),
containing frame-shift errors.
ACCESSION BC060780
VERSION BC060780.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4315)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4315)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: d Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361968
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..4315
/db_xref="H-InvDB:HIT000260082"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30339169"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1260 a 957 c 1054 g 1044 t
ORIGIN
1 ataccagaat taactctgct cagagttaga tttgctggtc ttaaagtact tttcctcttt
61 aagataaaag aagttcttct aaatcaggaa tggattgaaa tctaatgaac cgaaactttg
121 ggtaattgat caccctagac ccagggacac ccaattcatc gtaatcatca tgaataatca
181 aaaagtggta gctgtgctac tgcaagagtg caagcaagtg ctggatcagc tcttgttgga
241 agcgccagat gtgtcggaag aggacaagag cgaggaccag cgctgcagag ctttactccc
301 cagcgagtta aggaccctga tccaggaggc aaaggaaatg aagtggccct tcgtgcctga
361 aaagtggcag tacaaacaag ccgtgggccc agaggacaaa acaaacctga aggatgtgat
421 tggcgccggg ttgcagcagt tactggcgtc cctgagggcc tccatcctcg ctcgggactg
481 tgcggctgcg gcggctattg tgttcttggt ggaccggttc ctgtatgggc tcgacgtctc
541 tggaaaactt ctgcaggtcg ccaaaggtct ccacaagttg cagccagcca cgccaattgc
601 cccgcaggtg gttattcgcc aagcccgaat ctccgtgaac tcaggaaaac ttttaaaagc
661 agagtatatt ctgagcagtc taataagcaa caatggagca acgggtacct ggctgtacag
721 aaatgaaagt gacaaggtcc tggtgcagtc ggtctgtata cagatcagag ggcagattct
781 gcaaaagctg gggatgtggt acgaagcagc agagttaata tgggcctcca ttgtaggata
841 tttggcactt cctcagccgg ataaaaaggg cctctccacg tcgctaggta tactggcaga
901 catctttgtt tccatgagca agaacgatta tgaaaagttt aaaaacaatc cacaaattaa
961 tttgagcctg ctgaaggagt ttgaccacca tttgctgtcc gctgcagaag cctgcaagct
1021 ggcagctgcc ttcagtgcct atacgccgct cttcgtgctc acagctgtga atatccgtgg
1081 cacgtgttta ttgtcctaca gtagttcaaa tgactgtcct ccagaattga aaaacttaca
1141 tctgtgtgaa gccaaagagg cctttgagat tggcctcctc accaagagag atgatgagcc
1201 tgttactgga aaacaggagc ttcacagctt tgtcaaagct gctttcggtc tcaccacagt
1261 gcacagaagg ctccatgggg agacagggac ggtccatgca gcaagtcagc tctgtaagga
1321 agcaatgggg aagctgtaca atttcagcac ttcctccaga agtcaggaca gagaagctct
1381 gtctcaagaa gttatgtctg tgattgccca ggtgaaggaa catttacaag ttcaaagctt
1441 ctcaaatgta gatgacagat cttatgttcc cgagagtttc gagtgcaggt tggataaact
1501 tatcttgcat gggcaagggg atttccaaaa aatccttgac acctattcac agcaccatac
1561 ttcggtgtgt gaagtatttg aaagtgattg tggaaacaac aaaaatgaac agaaagatgc
1621 aaaaacagga gtctgcatca ctgctctaaa aacagaaata aaaaacatag atactgtgag
1681 tactactcaa gaaaagccac attgtcaaag agacacagga atatcttcct ccctaatggg
1741 taagaatgtt cagagggaac tcagaagggg aggaaggaga aactggaccc attctgatgc
1801 atttcgagtc tccttggatc aagatgtgga gactgagact gagccatcgg actacagcaa
1861 tggtgaggga gctgttttca acaagtctct gagtggcagc cagacttcca gtgcttggag
1921 caacttatca gggtttagtt cctctgcaag ctgggaggaa gtgaattatc acgttgacga
1981 caggtcagcc agaaaagagc ctggcaaaga acatctggtg gacactcagt gttccactgc
2041 cttgtctgag gagctagaga atgacaggga aggcagagct atgcattcat tgcattcaca
2101 gcttcatgat ctctctcttc aggaacccaa caatgacaat ttggagcctt ctcaaaatca
2161 gccacagcaa cagatgccct tgacaccctt ctcgcctcat aataccccag gcattttctt
2221 ggcccctggt gcagggcttc tagaaggagc tccagaaggt atccaggaag tcagaaatat
2281 gggacccaga aatacttctg ctcactccag accctcatat cgttctgctt cttggtcttc
2341 tgattctggt aggcccaaga atatgggcac acatccttca gtccaaaaag aagaagcctt
2401 tgaaataatt gttgagtttc cagaaaccaa ctgcgatgtc aaagacaggc aggggaaaga
2461 gcagggagaa gaaattagtg aaagaggcgc aggccctaca tttaaagcta gtccctcctg
2521 ggttgaccca gaaggagaaa cagcagaaag cactgaagat gcacccttag actttcacag
2581 ggtcctgcac aattctctgg gaaacatttc catgctgcca tgtagctcct tcacccctaa
2641 ttggcctgtt caaaatcctg actccagaaa aagtggtggc ccagtcgcag agcagggcat
2701 cgaccctgat gcctccacag tggatgagga ggggcaactg ctcgacagca tggatgttcc
2761 ctgcacaaat gggcacggct ctcatagact gtgcattctg agacagccgc ctggtcagag
2821 ggcggagacc cccaattcct ctgtaagcgg taacatcctc ttccctgtcc tcagcgagga
2881 ctgcactacc acagaggaag gaaatcagcc tggaaacatg ctaaactgca gccagaactc
2941 cagctcatcc tcagtgtggt ggctgaaatc acctgcattt tccagtggtt cttctgaggg
3001 ggacagccct tggtcctatc tgaattccag tgggagttct tgggtttcat tgccgggaaa
3061 gatgaggaaa gagatccttg aggctcgcac cttgcaacct gatgactttg aaaagctgtt
3121 ggcaggagtg aggcatgatt ggctgtttca gagactagag aatacggggg tttttaagcc
3181 cagtcaactc caccgagcac atagtgctct tttgttaaaa tattcaaaaa aatctgaact
3241 gtggacggcc caggaaacta ttgtctattt gggggactac ttgactgtga agaaaaaggc
3301 agacaaagaa atgctttttg ggttcatcat cttcatcaag aagaaattct ggggaggtat
3361 gttgggaaag actataagga gcagaagggg ctctggcacc acttcactga tgtggagcga
3421 cagatgaccg cacagcacta tgtgacagaa tttaacaaga gactctatga acaaaacatt
3481 cccacccaga tattctacat cccatccaca atactactga ttttagagga caagacaata
3541 aagggatgta tcagtgtgga gccttacata ctgggagaat ttgtaaaatt gtcaaataac
3601 acgaaagtgg tgaaaacaga atacaaagcc acagaatatg gcttggccta tggccatttt
3661 tcttatgagt tttctaatca tagagatgtt gtggtcgatt tacaaggttg ggtaaccggt
3721 aatggaaaag gactcatcta cctcacagat ccccagattc actccgttga tcagaaagtt
3781 ttcactacca attttggaaa gagaggaatt ttttacttct ttaataacca gcatgtggaa
3841 tgtaatgaaa tctgccatcg tctttctttg actagacctt caatggagaa accatgcaca
3901 tagaatacgg cacagtctgg tcctttgggg cttgggcagg gccgtgacac aggttctggc
3961 caatgatttg caagaggaat tgatcagtat cactttaagt cctgcattta attggcagca
4021 caagatcctg cagagcctct ttccctctgc cacagttatc aagaatgggt caggagaccg
4081 ctgcttctgg gcataagtcc tgcaaggaaa gcaacatgga aaacagcccc aactcaccca
4141 tgagggatga aaagcactct tgagaaaggc atgtgttgtt taagccattg agattttaga
4201 gctttttgtc actatctgtc aagactgata ctactggggc ttttcctatt gatttgggag
4261 ttctttacat attaaaaaaa tgtgagcctt tgtgatacga aaaaaaaaaa aaaaa
//