LOCUS BC059395 2966 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens egf-like module containing, mucin-like, hormone
receptor-like 1, mRNA (cDNA clone MGC:71725 IMAGE:30349201),
complete cds.
ACCESSION BC059395
VERSION BC059395.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2966)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2966)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: k Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40807488.
FEATURES Location/Qualifiers
source 1..2966
/db_xref="H-InvDB:HIT000259995"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71725 IMAGE:30349201"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2966
/gene="EMR1"
/db_xref="GeneID:2015"
/db_xref="MIM:600493"
CDS 44..2509
/gene="EMR1"
/codon_start=1
/product="EMR1 protein"
/protein_id="AAH59395.1"
/db_xref="GeneID:2015"
/db_xref="MIM:600493"
/translation="MRGFNLLLFWGCCVMHSWEGHIRPTRKPNTKGNNCRDSTLCPAY
ATCTNTVDSYYCACKQGFLSSNGQNHFKDPGVRCKDIDECSQSPQPCGPNSSCKNLSG
RYKCSCLDGFSSPTGNDWVPGKPGNFSCTDINECLTSSVCPEHSDCVNSMGSYSCSCQ
VGFISRNSTCEDVDECADPRACPEHATCNNTVGNYSCFCNPGFESSSGHLSFQGLKAS
CEDIDECTEMCPINSTCTNTPGSYFCTCHPGFAPSNGQLNFTDQGVECRDIDECRQDP
STCGPNSICTNALGSYSCGCIAGFHPNPEGSQKDGNFSCQRVLFKCKEDVIPDNKQIQ
QCQEGTAVKPAYVSFCAQINNIFSVLDKVCENKTTVVSLKNTTESFVPVLKQISTWTK
FTKEETSSLATVFLESVESMTLASFWKPSANITPAVRTEYLDIESKVINKECSEENVT
LDLVAKGDKMKIGCSTIEESESTETTGVAFVSFVGMESVLNERFFKDHQAPLTTSEIK
LKMNSRVVGGIMTGEKKDGFSDPIIYTLENIQPKQKFERPICVSWSTDVKGGRWTSFG
CVILEASETYTICSCNQMANLAIIMASGELTMGCAIIAGFLHYLFLACFFWMLVEAVI
LFLMVRNLKVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTE
TGFIWSFLGPVCTVIVINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLF
ILGCSWVLGIFQIGPVAGVMAYLFTIINSLQGAFIFLIHCLLNGQVREEYKRWITGKT
KPSSQSQTSRILLSSMPSASKTG"
BASE COUNT 786 a 721 c 704 g 755 t
ORIGIN
1 agtagaaaag tttcttttct ttgaatgaca gaactacagc ataatgcgtg gcttcaacct
61 gctcctcttc tggggatgtt gtgttatgca cagctgggaa gggcacataa gacccacacg
121 gaaaccaaac acaaagggta ataactgtag agacagtacc ttgtgcccag cttatgccac
181 ctgcaccaat acagtggaca gttactattg cgcttgcaaa caaggcttcc tgtccagcaa
241 tgggcaaaat cacttcaagg atccaggagt gcgatgcaaa gatattgatg aatgttctca
301 aagcccccag ccctgtggtc ctaactcatc ctgcaaaaac ctgtcaggga ggtacaagtg
361 cagctgttta gatggtttct cttctcccac tggaaatgac tgggtcccag gaaagccggg
421 caatttctcc tgtactgata tcaatgagtg cctcaccagc agcgtctgcc ctgagcattc
481 tgactgtgtc aactccatgg gaagctacag ttgcagctgt caagttggat tcatctctag
541 aaactccacc tgtgaagacg tggatgaatg tgcagatcca agagcttgcc cagagcatgc
601 aacttgtaat aacactgttg gaaactactc ttgtttctgc aacccaggat ttgaatccag
661 cagtggccac ttgagtttcc agggtctcaa agcatcgtgt gaagatattg atgaatgcac
721 tgaaatgtgc cccatcaatt caacatgcac caacactcct gggagctact tttgcacctg
781 ccaccctggc tttgcaccaa gcaatggaca gttgaatttc acagaccaag gagtggaatg
841 tagagatatt gatgagtgcc gccaagatcc atcaacctgt ggtcctaatt ctatctgcac
901 caatgccctg ggctcctaca gctgtggctg cattgcaggc tttcatccca atccagaagg
961 ctcccagaaa gatggcaact tcagctgcca aagggttctc ttcaaatgta aggaagatgt
1021 gatacccgat aataagcaga tccagcaatg ccaagaggga accgcagtga aacctgcata
1081 tgtctccttt tgtgcacaaa taaataacat cttcagcgtt ctggacaaag tgtgtgaaaa
1141 taaaacgacc gtagtttctc tgaagaatac aactgagagc tttgtccctg tgcttaaaca
1201 aatatccacg tggactaaat tcaccaagga agagacgtcc tccctggcca cagtcttcct
1261 ggagagtgtg gaaagcatga cactggcatc tttttggaaa ccctcagcaa atatcactcc
1321 ggctgttcgg acggaatact tagacattga gagcaaagtt atcaacaaag aatgcagtga
1381 agagaatgtg acgttggact tggtagccaa gggggataag atgaagatcg ggtgttccac
1441 aattgaggaa tctgaatcca cagagaccac tggtgtggct tttgtctcct ttgtgggcat
1501 ggaatcggtt ttaaatgagc gcttcttcaa agaccaccag gctcccttga ccacctctga
1561 gatcaagctg aagatgaatt ctcgagtcgt tgggggcata atgactggag agaagaaaga
1621 cggcttctca gatccaatca tctacactct ggagaacatt cagccaaagc agaagtttga
1681 gaggcccatc tgtgtttcct ggagcactga tgtgaagggt ggaagatgga catcctttgg
1741 ctgtgtgatc ctggaagctt ctgagacata taccatctgc agctgtaatc agatggcaaa
1801 tcttgccatt atcatggcgt ctggggagct cacgatgggc tgcgccatca tcgcgggctt
1861 cctgcactac cttttccttg cctgcttctt ctggatgctg gtggaggctg tgatactgtt
1921 cttgatggtc agaaacctga aggtggtgaa ttacttcagc tctcgcaaca tcaagatgct
1981 gcacatctgt gcctttggtt atgggctgcc gatgctggtg gtggtgatct ctgccagtgt
2041 gcagccacag ggctatggaa tgcataatcg ctgctggctg aatacagaga cagggttcat
2101 ctggagtttc ttggggccag tttgcacagt tatagtgatc aactcccttc tcctgacctg
2161 gaccttgtgg atactgaggc agaggctttc cagtgttaat gccgaagtct caacgctaaa
2221 agacaccagg ttactgacct tcaaggcctt tgcccagctc ttcatcctgg gctgctcctg
2281 ggtgctgggc atttttcaga ttggacctgt ggcaggtgtc atggcttacc tgttcaccat
2341 catcaacagc ctgcaggggg ccttcatctt cctcatccac tgtctgctca acggccaggt
2401 acgagaagaa tacaagaggt ggatcactgg gaagacgaag cccagctccc agtcccagac
2461 ctcaaggatc ttgctgtcct ccatgccatc cgcttccaag acgggttaaa gtcctttctt
2521 gctttcaaat atgctatgga gccacagttg aggacagtag tttcctgcag gagcctaccc
2581 tgaaatctct tctcagctta acatggaaat gaggatccca ccagccccag aaccctctgg
2641 ggaagaatgt tgggggcggt cttcctgtgg ttgtatgcac tgatgagaaa tcaggcgttt
2701 ctgctccaaa cgaccatttt atcttcgtgc tctgcaactt cttcaattcc agagtttctg
2761 agaacagacc caaattcaat ggcatgacca agaacacctg gctaccattt tgttttctcc
2821 tgcccttgtt ggtgcatggt tctaagcatg cccctccaga gcctatcata cgcctgatac
2881 agagaacctc tcaataaatg atttgtcgcc tgtctgactg atttacccta ggaaaaaaaa
2941 aaaaaaaaag aaaaaaaaaa aaaaaa
//