LOCUS BC059389 3774 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens gamma-aminobutyric acid (GABA) A receptor, gamma 2,
mRNA (cDNA clone MGC:71705 IMAGE:5288256), complete cds.
ACCESSION BC059389
VERSION BC059389.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3774)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3774)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: o Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38788134.
FEATURES Location/Qualifiers
source 1..3774
/db_xref="H-InvDB:HIT000259989"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71705 IMAGE:5288256"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3774
/gene="GABRG2"
/gene_synonym="CAE2"
/gene_synonym="ECA2"
/gene_synonym="GEFSP3"
/db_xref="GeneID:2566"
/db_xref="HGNC:HGNC:4087"
/db_xref="MIM:137164"
CDS 180..1607
/gene="GABRG2"
/gene_synonym="CAE2"
/gene_synonym="ECA2"
/gene_synonym="GEFSP3"
/codon_start=1
/product="gamma-aminobutyric acid (GABA) A receptor, gamma
2"
/protein_id="AAH59389.1"
/db_xref="GeneID:2566"
/db_xref="HGNC:HGNC:4087"
/db_xref="MIM:137164"
/translation="MSSPNIWSTGSSVYSTPVFSQKMTVWILLLLSLYPGFTSQKSDD
DYEDYASNKTWVLTPKVPEGDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIG
PVNAINMEYTIDIFFAQTWYDRRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADA
HWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEI
VYQWKRSSVEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFT
IQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTA
MDLFVSVCFIFVFSALVEYGTLRYFVSNRKPSKDKDKKKKNPLLRMFSFKAPTIDIRP
RSATIQMNNATHLQERDEEYGYECLDGKDCASFFCCFEDCRTGAWRHGRIHIRIAKMD
SYARIFFPTAFCLFNLVYWVSYLYL"
BASE COUNT 1157 a 732 c 712 g 1173 t
ORIGIN
1 tttctgcccc ctgaatatta attccctaat ctggtagcaa tccatctccc cagtgaagga
61 cctactagag gcaggtgggg ggagccacca tcagatcata agcataagaa taatacaaag
121 gggagggatt cttctgcaac caagaggcaa gaggcgagag aaggaaaaaa aaaaaagcga
181 tgagttcgcc aaatatatgg agcacaggaa gctcagtcta ctcgactcct gtattttcac
241 agaaaatgac ggtgtggatt ctgctcctgc tgtcgctcta ccctggcttc actagccaga
301 aatctgatga tgactatgaa gattatgctt ctaacaaaac atgggtcttg actccaaaag
361 ttcctgaggg tgatgtcact gtcatcttaa acaacctgct ggaaggatat gacaataaac
421 ttcggcctga tataggagtg aagccaacgt taattcacac agacatgtat gtgaatagca
481 ttggtccagt gaacgctatc aatatggaat acactattga tatatttttt gcgcaaacgt
541 ggtatgacag acgtttgaaa tttaacagca ccattaaagt cctccgattg aacagcaaca
601 tggtggggaa aatctggatt ccagacactt tcttcagaaa ttccaaaaaa gctgatgcac
661 actggatcac cacccccaac aggatgctga gaatttggaa tgatggtcga gtgctctaca
721 ccctaaggtt gacaattgat gctgagtgcc aattacaatt gcacaacttt ccaatggatg
781 aacactcctg ccccttggag ttctcaagtt atggctatcc acgtgaagaa attgtttatc
841 aatggaagcg aagttctgtt gaagtgggcg acacaagatc ctggaggctt tatcaattct
901 catttgttgg tctaagaaat accaccgaag tagtgaagac aacttccgga gattatgtgg
961 tcatgtctgt ctactttgat ctgagcagaa gaatgggata ctttaccatc cagacctata
1021 tcccctgcac actcattgtc gtcctatcct gggtgtcttt ctggatcaat aaggatgctg
1081 ttccagccag aacatcttta ggtatcacca ctgtcctgac aatgaccacc ctcagcacca
1141 ttgcccggaa atcgctcccc aaggtctcct atgtcacagc gatggatctc tttgtatctg
1201 tttgtttcat ctttgtcttc tctgctctgg tggagtatgg caccttgcgt tattttgtca
1261 gcaaccggaa accaagcaag gacaaagata aaaagaagaa aaaccctctt cttcggatgt
1321 tttccttcaa ggcccctacc attgatatcc gcccaagatc agcaaccatt caaatgaata
1381 atgctacaca ccttcaagag agagatgaag agtacggcta tgagtgtctg gacggcaagg
1441 actgtgccag ttttttctgc tgttttgaag attgtcgaac aggagcttgg agacatggga
1501 ggatacatat ccgcattgcc aaaatggact cctatgctcg gatcttcttc cccactgcct
1561 tctgcctgtt taatctggtc tattgggtct cctacctcta cctgtgagga ggtatgggtt
1621 ttactgatat ggttcttatt cactgagtct catggagaga tgtctgttct aagtccactt
1681 aaataatcct ctatgtggtt gataatgatc tgaatctgtt tctatgtcca aacctggtaa
1741 attttataat gtcatattgt ttgtgccaag ccctcctttg gttagtgtac tttgaacttc
1801 gatgtttgct gtgtttcaaa cctgcaaggc aaagtaaaat tagagcaaga acattcaaac
1861 caaataagat atttttcagc tacagcaaat aaaacagtga aagccctgac tatttacagt
1921 agtggtatcc ttactagatt cataatgcaa ttagatagaa aaggtccaaa actgtaccct
1981 atgttcactc cgggtcaagt tgtgataaat ttgatcccaa tagaatacct ccctcattta
2041 agaaaaatca taactcactt taaatatgaa agcctagtcc agaaatctat tacaccttta
2101 tctcaagata ggaagaaaat ttcctccaca ttcatgtaca atgatgtaaa tatttcaata
2161 acttagaatg cttcaagttt agtgcatgca tctctttaga tccaaaataa atggactgaa
2221 gttatcatcc tattgtcttt tattttgtgt ccttgggcta taaaagattc ctgaatgtaa
2281 ttataaggat ttgggtttgg aaatggaggg aggaattttc attgccttct ccctcatgca
2341 tgaagattcg aacagcttat tttttccttg tatgacatat tacaacactt taagtaaaat
2401 atagactgga taatcaacat ttgccacctc taaatatgcc caatttcata actagagtat
2461 aaagtaatcg tatgtgcttg ccgctatttt tttcttcctt ttaggatgat agatcataac
2521 agaacttatt ctccatctca agatctgctt ctagtgattg tgagtgcctt gtgggcagaa
2581 tccttgtcat ttcctctttg ggtctgtagc accttgcata gtgcctggca tatagttggt
2641 gctcaataaa tatggtttga agtgaattgc cctcacatgc ttctggcaaa tctctgtgct
2701 ggcctgaaac cagtgactca tcttctcaca taggtgttgt caagtgatat ttgattttgt
2761 aaaaataacc agtaggatcc aaagaacttt agctatttat gttcatcttc aaaaaattat
2821 tttaggcaaa gtccatactc cttttaaaac aatatttatg tcctatgttt gtgtatagac
2881 atgactctac tagggcataa ttagagtttg tgtattattt ttccaggttt ggggatgagt
2941 cagtccttgc ccatccacaa ttttgtttgt gaacttataa caggaataag caaaattcat
3001 acctgactag tgttcagaat gtagcattct gtgcgaaaaa gtattgaaga ttagctttta
3061 aaaactgaaa aaaaaaaatg aatgactcac atagaggttg agccaatgac tgtggcctca
3121 ttagattaca ttgtagttaa acaaagcaat ttctccagac ttaaaacatg atgagttgag
3181 ctctatcttc atgtactcat cctgaatcct tatttttcta aaatagcacc ctttgttaat
3241 tatttttatg gaaattatta ctctgtcata attaaatcat agctagtata actttacaga
3301 taacctaaaa agaatagaaa agaagagaga gtggctttgt cagtataaaa ccatgtaaag
3361 tcatcatcaa gtcatctgga tgaatcttga aacacattta gctgccagtt ttacaaacct
3421 ttaatatatc agtgctccag tatataacct caaacaaatg taaatagaac gaattatttt
3481 cttgttttga attgtcaata tattaaatgt tgactctttg ggagagttgt tggcaagttt
3541 caatggtgag aaacattatt gtcaacttga aatgtgttct gtaatgggga cactacaaaa
3601 agctagcttt ccaatgtgtg catagtattg gcaatatgaa tatatattat atataatcta
3661 atacttatta taagctgctc cctgtctatg tatttggaaa ccttttcaca aagggaattg
3721 cctaacatgt ggacttttac aataaaaatg ctgcattcta aaaaaaaaaa aaaa
//