LOCUS BC059384 1987 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens glutamate receptor, ionotropic, N-methyl D-aspartate
2C, mRNA (cDNA clone IMAGE:5302958), complete cds.
ACCESSION BC059384
VERSION BC059384.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1987)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1987)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: p Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6006004
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1987
/db_xref="H-InvDB:HIT000259984"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5302958"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1987
/gene="GRIN2C"
/gene_synonym="NR2C"
/db_xref="GeneID:2905"
/db_xref="MIM:138254"
CDS 411..926
/gene="GRIN2C"
/gene_synonym="NR2C"
/codon_start=1
/product="GRIN2C protein"
/protein_id="AAH59384.1"
/db_xref="GeneID:2905"
/db_xref="MIM:138254"
/translation="MGGALGPALLLTSLFGAWAGLGPGQGEQGMTVAVVFSSSGPPQA
QFRARLTPQSFLDLPLEIQPLTVGVNTTNPSSLLTQICGLLGAAHVHGIVFEDNVDTE
AVAQILDFISSQTHVPILSISGGSAVVLTPKVHVQTHVPSCLRPGTRLGSGVLWFWEA
GIRRDGQGGGG"
BASE COUNT 401 a 569 c 630 g 387 t
ORIGIN
1 gcgagtcccg cttcttcccc ttccagctct gccccatctc ctttgcccca gcctagctct
61 ctccttcctg cgacctggga gaatcggagt gggcttccag agtagtggca tcttgcagat
121 gctggcccgt gcccggctcc cgggcttcca gagcgcaaag ggaagggtag gcagagaggg
181 cactgggcga gcaagacctg gcgctgggcc ctggctgcgc accagccgcc tgcgccggtc
241 tctgtgggct tcgcccagga tccccgacgg cggggagggg aagccccgag tctcctgttt
301 cctgcctacg cgggcagggc ggggacacgc ggagcaaagg cacccggcaa cctgaacccc
361 caggtgcgtc ccgcgaccct gcaaggagct gctgggaccc tccggtggac atgggtgggg
421 ccctggggcc ggccctgttg ctcacctcgc tcttcggtgc ctgggcaggg ctgggtccgg
481 ggcagggcga gcagggcatg acggtggccg tggtgtttag cagctcaggg ccgccccagg
541 cccagttccg tgcccgcctc accccccaga gcttcctgga cctacccctg gagatccagc
601 cgctcacagt tggggtcaac accaccaacc ccagcagcct cctcacccag atctgcggcc
661 tcctgggtgc tgcccacgtc cacggcattg tctttgagga caacgtggac accgaggcgg
721 tggcccagat ccttgacttc atctcctccc agacccatgt gcccatcctc agcatcagcg
781 gaggctctgc tgtggtcctc acccccaagg tgcatgtcca aactcatgtc ccctcgtgcc
841 tcaggcctgg aaccaggctg gggtcggggg tgctttggtt ctgggaagct gggattagac
901 gggatgggca gggaggtggg ggctgagggc atgatgtggg tgatggggag atggttatgg
961 gaatgacatc ccatgttcta gaggagagat attctgggct gacctcacat tgtgtctgga
1021 tgaggggtgg gcagggtgca ggcccaccct ctggctgtgg ggctcaggcc ccagccctcc
1081 tcctctctgc ttccctcagc ttcctaggtc agggtgaaga cccagagggc cagccgggca
1141 tggaggtggt gccatgccct ctgggcagtg gtagttgacc tgtagggtga gcaccaggga
1201 accctgggag ccctggggga ggcagaaacg gccctgccct tgcagggctc aggggagaac
1261 gttccaaaca cacattcatc agcagttaca actaggacaa gcgttctgaa ggaaagacac
1321 aggatgctgt gagggagctc actcatggct catgcatagg gtgttggcca gggaaagtct
1381 ctggagaaat gatgtctagg ctgagggcct aagggcgagc cggtggggag ggggagaggc
1441 ccaggcagag aagcaggtgg gatgaaggcc ccaaggcgag gaaggagctc agagctttgg
1501 aggaatagag ggaaaagcct ggagaaggag gcgggggcct ggccacctgg gaagacattt
1561 gggcttttcc ctaagcaagt gagcagacag ggcagcgcaa gccggctgtg acagtggccg
1621 tggtctgtgc ctgccttagc cctgtgagct tcctggccct gcccctgttg atctagccac
1681 taagggaaga gcggaggaga gttgagggaa gagactgatc tgattcgcct ttgtttcatt
1741 aatttttata tgaagaattt tgagtataca ttaaaaagta taaggaagac tcatatatcc
1801 cccattcgcc ctggccatcc accccagcct caccagcacc cccttcccct tcttctgtgt
1861 taatttgaat caaagcccag gcatcctctt attccatcca taaatatttc agtatgtatc
1921 cctggcagat aagggcttaa gaacgtaaaa ccaccataca ttatcacgtc taaaaaaaaa
1981 aaaaaaa
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