LOCUS BC059376 3255 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens gamma-aminobutyric acid (GABA) A receptor, epsilon,
mRNA (cDNA clone MGC:71624 IMAGE:4799619), complete cds.
ACCESSION BC059376
VERSION BC059376.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3255)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3255)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: k Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 12707559.
FEATURES Location/Qualifiers
source 1..3255
/db_xref="H-InvDB:HIT000259976"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71624 IMAGE:4799619"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3255
/gene="GABRE"
/db_xref="GeneID:2564"
/db_xref="MIM:300093"
CDS 52..1149
/gene="GABRE"
/codon_start=1
/product="GABRE protein"
/protein_id="AAH59376.1"
/db_xref="GeneID:2564"
/db_xref="MIM:300093"
/translation="MLSKVLPVFLGILLILQSRVEGPQTESKNEASSRDVVYGPQPQP
LENQLLSEETKSTETETGSRVGKLPEASRILNTILSNYDHKLRPGIGEKPTVVTVEIA
VNSLGPLSILDMEYTIDIIFSQTWYDERLCYNDTFESLVLNGNVVSQLWIPDTFFRNS
KRTHEHEITMPNQMVRIYKDGKVLYTIRMTIDAGCSLHMLRFPMDSHSCPLSFSSFSY
PENEMIYKWENFKLEINEKNSWKLFQFDFTGVSNKTEIITTPVGDFMVMTIFFNVSRR
FGYVAFQNYVPSSVTTMLSWVSFWIKTESAPARTSLGITSVLTMTTLGTFSRKNFPRV
SYITALDFYIAICFVFCFCALLEFAVLNFLM"
BASE COUNT 749 a 893 c 720 g 893 t
ORIGIN
1 agtgcgtgag ccgcgacctc cgcgcaggtg gtcgcgccgg tctccacgga aatgttgtcg
61 aaagttcttc cagtcttcct aggcatctta ttgatcctcc agtcgagggt cgagggacct
121 cagactgaat caaagaatga agcctcttcc cgtgatgttg tctatggccc ccagccccag
181 cctctggaaa atcagctcct ctctgaggaa acaaagtcaa ctgagactga gactgggagc
241 agagttggca aactgccaga agcctctcgc atcctgaaca ctatcctgag taattatgac
301 cacaaactgc gccctggcat tggagagaag cccactgtgg tcactgttga gatcgccgtc
361 aacagccttg gtcctctctc tatcctagac atggaataca ccattgacat catcttctcc
421 cagacctggt acgacgaacg cctctgttac aacgacacct ttgagtctct tgttctgaat
481 ggcaatgtgg tgagccagct atggatcccg gacacctttt ttaggaattc taagaggacc
541 cacgagcatg agatcaccat gcccaaccag atggtccgca tctacaagga tggcaaggtg
601 ttgtacacaa ttaggatgac cattgatgcc ggatgctcac tccacatgct cagatttcca
661 atggattctc actcttgccc tctatctttc tctagctttt cctatcctga gaatgagatg
721 atctacaagt gggaaaattt caagcttgaa atcaatgaga agaactcctg gaagctcttc
781 cagtttgatt ttacaggagt gagcaacaaa actgaaataa tcacaacccc agttggtgac
841 ttcatggtca tgacgatttt cttcaatgtg agcaggcggt ttggctatgt tgcctttcaa
901 aactatgtcc cttcttccgt gaccacgatg ctctcctggg tttccttttg gatcaagaca
961 gagtctgctc cagcccggac ctctctaggg atcacctctg ttctgaccat gaccacgttg
1021 ggcacctttt ctcgtaagaa tttcccgcgt gtctcctata tcacagcctt ggatttctat
1081 atcgccatct gcttcgtctt ctgcttctgc gctctgttgg agtttgctgt gctcaacttc
1141 ctgatgtaat ggtgagaagt tggaggagag aagccaagat atggtgtgct aaagacagtt
1201 tccagaaaat ccggaggcag cacttagact tgggttatct tcccttgact tttccccact
1261 tctttccttg tccattttag cctcgtatca atagccgtgc ccatgcccgt acccgtgcac
1321 gttcccgagc ctgtgcccgc caacatcagg aagcttttgt gtgccagatt gtcaccactg
1381 agggaagtga tggagaggag cgcccgtctt gctcagccga gcagccccct agcccaggta
1441 gccctgaggg tccccgcagc ctctgctcca agctggcctg ctgtgagtgg tgcaagcgtt
1501 ttaagaagta cttctgcatg gtccccgatt gtgagggcag tacctggcag cagggccgcc
1561 tctgcatcca tgtctaccgc ctggataact actcgagagt tgttttccca gtgactttct
1621 tcttcttcaa tgtgctctac tggcttgttt gccttaactt gtaggtacca gctggtaccc
1681 tgtggggcaa cctctccagt tccccaggag gtccaagccc cttgccaagg gagttggggg
1741 aaagcagcag cagcagcagg agcgactaga gtttttcctg ccccattccc caaacagaag
1801 cttgcagagg gtttgtcttt gctgcccctc tcccctacct ggcccattca ctgagtcttc
1861 tcagcagacc atttcaaatt attaataaat gggccacctc cctcttcttc aaggagcatc
1921 cgtgatgctc agtgttcaaa accacagcca cttagtgatc agctccctaa aaccatgcct
1981 aagtacaggc ggattagcta tcttccaaca atgctgacca ccagacaatt actgcatttt
2041 tccagaagcc cactattgcc tttgtagtgc tttcggccca gttctggcct cagcctcaaa
2101 gtgcaccgac tagttgcttg cctatacctg gcacctcatt aagatgctgg gcagcagtat
2161 aacaggagga agagatccct ctcctttggt cagattatta tgttctcagt tctctctccc
2221 tgctacccct ttctctgcag atagatagac actggcatta tccctttagg aagagggggg
2281 ggcagcaaga gagcctattt gggacagcat tcctctctct ctgctgctgt gacatctccc
2341 tctccttgct ggctccatct ttcgtctgca ctaccaattc aatgcccttc atccaatggg
2401 tatctatttt tgtgtgtgat tatagtaact actacctgct ttatatgcca ccctcttcct
2461 tctctttgac ccctgtgact ctttctgtaa ctttcccagt gacttcccct agccctgacc
2521 caggcactag gccttggtga cttcctgggg ccaagaaact aaggaaactc ggctttgcaa
2581 caggcattac tcgccattga ttggtgccca cccagggcac actgtcggag ttctatcact
2641 tgcttgaccc ctggacccat aaaccagtcc actgttatac ccggggcact ctaaccatca
2701 caatcaatca atcaaattcc cttaaatttg tatggcactg gaactttggc aaagcacttt
2761 tgacaagttg tgtctgattg gagcttcatg atagccttgt gacatcttta gggcaggatt
2821 cttatcccca ttttgcagat gaaaaccctg agtcacagat ttctgtggga ctgtggatct
2881 cactggaagc tatccaagag cccactgtca ccttctagac cacatgatag ggctagacag
2941 ctaagttcac catgattctc ttctgtcacc tctgctggca caccagtggc aaggcccaga
3001 atggcgacct ctctttagct caatttctgg gcctgaggtg ctcagactgc ccccaagatc
3061 aaatctctcc tggctgtagt aacccagtgg aatgaatttg gacatgcccc aatgcttcta
3121 tatgctaagt gaaatctgtg tctgtaattt gttggggggt ggatagggtg gggtctccat
3181 ctactttttg tcaccatcat ctgaaatggg gaaatatgta aataaatata tcagcaaagc
3241 aaaaaaaaaa aaaaa
//