LOCUS BC058918 4496 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens tumor protein p53 binding protein, 2, mRNA (cDNA clone
MGC:65089 IMAGE:4537206), complete cds.
ACCESSION BC058918
VERSION BC058918.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4496)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4496)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: b Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4885642.
FEATURES Location/Qualifiers
source 1..4496
/db_xref="H-InvDB:HIT000259928"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:65089 IMAGE:4537206"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4496
/gene="TP53BP2"
/gene_synonym="53BP2"
/gene_synonym="ASPP2"
/gene_synonym="BBP"
/gene_synonym="p53BP2"
/gene_synonym="PPP1R13A"
/db_xref="GeneID:7159"
/db_xref="HGNC:HGNC:12000"
/db_xref="MIM:602143"
CDS 251..3655
/gene="TP53BP2"
/gene_synonym="53BP2"
/gene_synonym="ASPP2"
/gene_synonym="BBP"
/gene_synonym="p53BP2"
/gene_synonym="PPP1R13A"
/codon_start=1
/product="TP53BP2 protein"
/protein_id="AAH58918.2"
/db_xref="GeneID:7159"
/db_xref="HGNC:HGNC:12000"
/db_xref="MIM:602143"
/translation="MRFGSKMMPMFLTVYLSNNEQHFTEVPVTPETICRDVVDLCKEP
GESDCHLAEVWCGSERPVADNERMFDVLQRFGSQRNEVRFFLRHERPPGRDIVSGPRS
QDPSLKRNGVKVPGEYRRKENGVNSPRMDLTLAELQEMASRQQQQIEAQQQLLATKEQ
RLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQEAKLKKVRALKGHVEQKRLSNGKLVE
EIEQMNNLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDSHHDNQSAVAELDRLYKEL
QLRNKLNQEQNAKLQQQRECLNKRNSEVAVMDKRVNELRDRLWKKKAALQQKENLPVS
SDGNLPQQAASAPSRVAAVGPYIQSSTMPRMPSRPELLVKPALPDGSLVIQASEGPMK
IQTLPNMRSGAASQTKGSKIHPVGPDWSPSNADLFPSQGSASVPQSTGNALDQVDDGE
VPLREKEKKVRPFSMFDAVDQSNAPPSFGTLRKNQSSEDILRDAQVANKNVAKVPPPV
PTKPKQINLPYFGQTNQPPSDIKPDGSSQQLSTVVPSMGTKPKPAGQQPRVLLSPSIP
SVGQDQTLSPGSKQESPPAAAVRPFTPQPSKDTLLPPFRKPQTVAASSIYSMYTQQQA
PGKNFQQAVQSALTKTHTRGPHFSSVYGKPVIAAAQNQQQHPENIYSNSQGKPGSPEP
ETEPVSSVQENHENERIPRPLSPTKLLPFLSNPYRNQSDADLEALRKKLSNAPRPLKK
RSSITEPEGPNGPNIQKLLYQRTTIAAMETISVPSYPSKSASVTASSESPVEIQNPYL
HVEPEKEVVSLVPESLSPEDVGNASTENSDMPAPSPGLDYEPEGVPDNSPNLQNNPEE
PNPEAPHVLDVYLEEYPPYPPPPYPSGEPEGPGEDSVSMRPPEITGQVSLPPGKRTNL
RKTGSERIAHGMRVKFNPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNA
VCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYS
DMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD
CMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGLYPRIKPRQRSLA"
BASE COUNT 1345 a 1047 c 1082 g 1022 t
ORIGIN
1 gggagccccg accgtcacga gcgtcgaaga gacaaagccg cgtcaggggg cccggccggg
61 gcgggggagc ccggggcttg ttggtgcccc agcccgcgcg gagggccctt cggacccgcg
121 cgccgccgct gccgccgccg ccgcctcgca acaggtccgg gcggcctcgc tctccgctcc
181 cctcccccgc atccgcgacc ctccggggca cctcagctcg gccggggccg cagtctggcc
241 acccgcttcc atgcggttcg ggtccaagat gatgccgatg tttcttaccg tgtatctcag
301 taacaatgag cagcacttca cagaagttcc agttactcca gaaacaatat gcagagacgt
361 ggtggatctg tgcaaagaac ccggcgagag tgattgccat ttggctgaag tgtggtgtgg
421 ctctgaacgt ccagttgcgg ataatgagcg aatgtttgat gttcttcaac gatttggaag
481 tcagaggaac gaagttcgct tcttccttcg tcatgaacgc ccccctggca gggacattgt
541 gagtggacca agatctcagg atccaagttt aaaaagaaat ggtgtaaaag ttcctggtga
601 atatcgaaga aaggagaacg gtgttaatag tcctaggatg gatctgactc ttgctgaact
661 tcaggaaatg gcatctcgcc agcagcaaca gattgaagcc cagcaacaat tgctggcaac
721 taaggaacag cgcttaaagt ttttgaaaca acaagatcag cgacaacagc aacaagttgc
781 tgagcaggag aaacttaaaa ggctaaaaga aatagctgag aatcaggaag ctaagctaaa
841 aaaagtgaga gcacttaaag gccacgtgga acagaagaga ctaagcaatg ggaaacttgt
901 ggaggaaatt gaacagatga ataatttgtt ccagcaaaaa cagagggagc tcgtcctggc
961 tgtgtcaaaa gtagaagaac tgaccaggca gctagagatg ctcaagaacg gcaggatcga
1021 cagccaccat gacaatcagt ctgcagtggc tgagcttgat cgcctctata aggagctgca
1081 gctaagaaac aaattgaatc aagagcagaa tgccaagcta caacaacaga gggagtgttt
1141 gaataagcgt aattcagaag tggcagtcat ggataagcgt gttaatgagc tgagggaccg
1201 gctgtggaag aagaaggcag ctctacagca aaaagaaaat ctaccagttt catctgatgg
1261 aaatcttccc cagcaagccg cgtcagcccc aagccgtgtg gctgcagtag gtccctatat
1321 ccagtcgtct actatgcctc ggatgccctc aaggcctgaa ttgctggtga agccagccct
1381 gccggatggt tccttggtca ttcaggcttc agaggggccg atgaaaatac agacactgcc
1441 caacatgaga tctggggctg cttcacaaac taaaggctct aaaatccatc cagttggccc
1501 tgattggagt ccttcaaatg cagatctttt cccaagccaa ggctctgctt ctgtacctca
1561 aagcactggg aatgctctgg atcaagttga tgatggagag gttccgctga gggagaaaga
1621 gaagaaagtg cgtccgttct caatgtttga tgcagtagac cagtccaatg ccccaccttc
1681 ctttggtact ctgaggaaga accagagcag tgaagatatc ttgcgggatg ctcaggttgc
1741 aaataaaaat gtggctaaag taccacctcc tgttcctaca aaaccaaaac agattaattt
1801 gccttatttt ggacaaacta atcagccacc ttcagacatt aagccagacg gaagttctca
1861 gcagttgtca acagttgttc cgtccatggg aactaaacca aaaccagcag ggcagcagcc
1921 gagagtgctg ctatctccca gcataccttc ggttggccaa gaccagaccc tttctccagg
1981 ttctaagcaa gaaagtccac ctgctgctgc cgtccggccc tttactcccc agccttccaa
2041 agacacctta cttccaccct tcagaaaacc ccagaccgtg gcagcaagtt caatatattc
2101 catgtatacg caacagcagg cgccaggaaa aaacttccag caggctgtgc agagcgcgtt
2161 gaccaagact cataccagag ggccacactt ttcaagtgta tatggtaagc ctgtaattgc
2221 tgctgcccag aatcaacagc agcacccaga gaacatttat tccaatagcc agggcaagcc
2281 tggcagtcca gaacctgaaa cagagcctgt ttcttcagtt caggagaacc atgaaaacga
2341 aagaattcct cggccactca gcccaactaa attactgcct ttcttatcta atccttaccg
2401 aaaccagagt gatgctgacc tagaagcctt acgaaagaaa ctgtctaacg caccaaggcc
2461 tctaaagaaa cgtagttcta ttacagagcc agagggtcct aatgggccaa atattcagaa
2521 gcttttatat cagaggacca ccatagcggc catggagacc atctctgtcc catcataccc
2581 atccaagtca gcttctgtga ctgccagctc agaaagccca gtagaaatcc agaatccata
2641 tttacatgtg gagcccgaaa aggaggtggt ctctctggtt cctgaatcat tgtccccaga
2701 ggatgtgggg aatgccagta cagagaacag tgacatgcca gctccttctc caggccttga
2761 ttatgagcct gagggagtcc cagacaacag cccaaatctc cagaataacc cagaagaacc
2821 aaatccagag gctccacatg tgcttgatgt gtacctggag gagtaccctc catacccacc
2881 cccaccatac ccatctgggg agcctgaagg gcccggagaa gactcggtga gcatgcgccc
2941 gcctgaaatc accgggcagg tctctctgcc tcctggtaaa aggacaaact tgcgtaaaac
3001 tggctcagag cgtatcgctc atggaatgag ggtgaaattc aacccccttg ctttactgct
3061 agattcgtct ttggagggag aatttgacct tgtacagaga attatttatg aggttgatga
3121 cccaagcctc cccaatgatg aaggcatcac ggctcttcac aatgctgtgt gtgcaggcca
3181 cacagaaatc gttaagttcc tggtacagtt tggtgtaaat gtaaatgctg ctgatagtga
3241 tggatggact ccattacatt gtgctgcctc atgtaacaac gtccaagtgt gtaagttttt
3301 ggtggagtca ggagccgctg tgtttgccat gacctacagt gacatgcaga ctgctgcaga
3361 taagtgcgag gaaatggagg aaggctacac tcagtgctcc caatttcttt atggagttca
3421 ggagaagatg ggcataatga ataaaggagt catttatgcg ctttgggatt atgaacctca
3481 gaatgatgat gagctgccca tgaaagaagg agactgcatg acaatcatcc acagggaaga
3541 cgaagatgaa atcgaatggt ggtgggcgcg ccttaatgat aaggagggat atgttccacg
3601 taacttgctg ggactgtacc caagaattaa accaagacaa aggagcttgg cctgaaactt
3661 ccacacagaa ttttagtcaa tgaagaatta atctctgtta agaagaagta atacgattat
3721 ttttggcaaa aatttcacaa gacttatttt aatgacaatg tagcttgaaa gcgatgaaga
3781 atgtctctag aagagaatga aggattgaag aattcaccat tagaggacat ttagcgtgat
3841 gaaataaagc atctacgtca gcaggccata ctgtgttggg gcaaaggtgt cccgtgtagc
3901 actcagataa gtatacagcg acaatcctgt tttctacaag aatcctgtct agtaaatagg
3961 atcatttatt gggcagttgg gaaatcagct ctctgtcctg ttgagtgttt tcagcagctg
4021 ctcctaaacc agtcctcctg ccagaaagga ccagtgccgt cacatcgctg tctctgattg
4081 tccccggcac cagcaggccc ttggggggct cacctgaagg ctcgaaggca ctgcacactt
4141 gtatattgtc agtgaagaac tgttagttgg ttgtcagtga acaataactt tattatatga
4201 gtttttgtag catcttaaga attatacata tgtttgaaat attgaaacta agctacggta
4261 ccagtaatta gatgtagaat cttgtttgta ggctgaattt taatctgtat ttattgtctt
4321 ttgtatctca gaaattagaa acttgctaca gacttacccg taatatttgt caagatcata
4381 gctgacttta aaaacagttg taataaactt tttgatgcta aaaaaaaaaa aaaaaaaaaa
4441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//