LOCUS BC058904 2648 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens armadillo repeat containing, X-linked 5, mRNA (cDNA
clone MGC:64967 IMAGE:5531406), complete cds.
ACCESSION BC058904
VERSION BC058904.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2648)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2648)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41054845.
FEATURES Location/Qualifiers
source 1..2648
/db_xref="H-InvDB:HIT000259914"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:64967 IMAGE:5531406"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2648
/gene="ARMCX5"
/gene_synonym="FLJ12969"
/gene_synonym="FLJ13382"
/db_xref="GeneID:64860"
/db_xref="HGNC:HGNC:25772"
CDS 614..2290
/gene="ARMCX5"
/gene_synonym="FLJ12969"
/gene_synonym="FLJ13382"
/codon_start=1
/product="armadillo repeat containing, X-linked 5"
/protein_id="AAH58904.1"
/db_xref="GeneID:64860"
/db_xref="HGNC:HGNC:25772"
/translation="MVDSGTEARARGKAEAGLQDGISGPATARVNGKTQAEAVAEAEL
KTESVTQAKAGDGAMTRTHTVTYREAMAVTREVIKVEDTTKTRVMVETKTKPLAERSI
VPQTKSKAMPMSRVSTVTKSEVKVVAVIEANIRSYAKSHDKANTGSRPDRREETSIGM
KSSDEDEENICSWFWTGEEPSVGSWFWPEEETSLQVYKPLPKIQEKPKPTHKPTLTIK
QKVIAWSRARYIVLVPVEGGEQSLPPEGNWTLVETLIETPLGIRPLTKIPPYHGPYYQ
TLAEIKKQIRQREKYGPNPKACHCKSRGFSLEPKEFDKLVALLKLTKDPFIHEIATMI
MGISPAYPFTQDIIHDVGITVMIENLVNNPNVKEHPGALSMVDDSSESSEEPKSGESY
IHQVCKGIISCPLNSPVQLAGLKLLGHLSIKFEDHYVITSYIPDFLTLLNKGSVKTKF
YVLKVFSCLSKNHANTRELISAKVLSSLVAPFNKNESKANILNIIEIFENINFQFKTK
AKLFTKEKFTKSELISIFQEAKQFGQKLQDLAEHSDPEVRDKVIRLILKL"
BASE COUNT 826 a 529 c 603 g 690 t
ORIGIN
1 cgtggaagaa cctcgtctgc ggaggaaaag gtagatgtta aatggtaact acgcgcgagg
61 ttctgaggag ccctgggaac aggaaggaga aaagaatacc aaaagtgaca acagtttgcc
121 aatcgcagtc tttaatctga taaagcggtt atctcgtctt gagtcccagg tgccgagtca
181 atccccatac acagccgccg ccattgcctc gagtccttgt gtctgactgt ctgttcctgc
241 tgctgtatga cacagcacct cgaggcaagg aaataagaaa actgcctctg atccaagcag
301 agaaggtctg cctgtagatc tgctgtaggg cttgtcacca ttggaagcaa ggtcctactt
361 cagtggcaga tctggtggcc ttggagtggc tgaagaccac caccctccac agggctgggc
421 ccatgcacag ccatccttcc ctaccttgag tgagcttcct ctgcatgttt tctatatcac
481 tggcagagcc tgtagttgga aaggggacag agtgactact ggactttgtg tgaaaacacc
541 aaccgggaca aaacttcagt caaggctgag acgggtgggg gtatataact tgtccttacg
601 ttaaacttgg aacatggttg actctgggac agaagcaagg gctagaggaa aggctgaggc
661 tggcctgcaa gatggaatca gtggtcctgc cactgctaga gtgaatggta aaacccaggc
721 cgaggcagtg gctgaggcag aactgaaaac agaatcagtg acccaggcaa aagctggtga
781 tggagcaatg accaggacac atacagtgac ctacagggag gctatggctg tgacaaggga
841 agtgatcaag gtggaagata caactaagac tagagtcatg gttgagacta agacaaaacc
901 cctggcagaa cgcagtatag tgccacaaac caagtcaaag gccatgccta tgtctagggt
961 cagtactgta accaagtctg aagtcaaggt tgttgctgtc attgaggcaa atattaggtc
1021 ctatgccaag tcacatgata aggccaatac tgggtccaga cctgacagaa gggaagagac
1081 cagcattggg atgaaatcca gtgatgagga tgaagaaaat atatgctcct ggttctggac
1141 tggagaagag cctagtgtag ggtcctggtt ctggcctgaa gaagagacct ctcttcaagt
1201 ttataagccc ctacctaaga tccaggaaaa gcccaagccc acacacaaac ccacacttac
1261 tataaaacaa aaggtaatag catggtcaag ggccaggtat attgtcctag ttccagttga
1321 aggaggggag caatccttgc ctccagaagg aaactggacc ctggttgaga ccttgattga
1381 aactcctctg gggattcgac ctttgaccaa gatcccacct tatcatgggc cttattacca
1441 gaccttagct gagatcaaaa aacagattag gcaaagggaa aagtatgggc ctaatccgaa
1501 ggcctgccac tgcaaatcac gtggctttag tttagagcct aaagagtttg ataaacttgt
1561 tgccctcctt aagttaacta aggatccttt cattcatgaa atagctacaa tgataatggg
1621 catcagtcct gcttatccat ttactcaaga tataattcat gatgtaggta ttactgttat
1681 gattgaaaac ttggtcaata atcccaatgt taaagaacac cctggagctt taagtatggt
1741 ggatgacagc tctgagtctt ccgaagaacc aaaatcaggg gagtcatata tacatcaagt
1801 ttgtaaaggc ataatctctt gccccttgaa ctcccctgtg cagctggctg gactgaaatt
1861 actagggcac ttgagtataa aatttgaaga tcactatgtg attaccagtt atattccaga
1921 tttcctcacc ttgttaaaca agggaagtgt caaaaccaag ttttatgttt taaaagtgtt
1981 ttcgtgtttg tctaaaaatc acgccaatac aagagaattg atcagtgcca aagtactgtc
2041 atcattggtt gcacccttta acaagaatga gtcaaaggcc aatattctta atattattga
2101 aatatttgag aatataaatt ttcagttcaa aacaaaggca aagctattta ccaaggaaaa
2161 gttcactaaa tctgagctta tttcaatatt ccaggaagca aaacagtttg gtcagaaact
2221 ccaagactta gcagagcaca gtgatcccga agtgagagat aaagtcatac gattaatact
2281 aaaactctga atacccctct gttctcataa agcctcaaac agttttttgg agttgcaata
2341 tgaaaccaat gcatattgta attataaatt caatacttat gttttccatg ttgattgagg
2401 gaggcaattt tatggatacc aattaatctt gagatcctga acatgtgctg atttttattg
2461 tgctatatag tatataaatt gagatatttt tggtatttct gcaacgtgac ctgataatga
2521 atctattcat cctgagtaag ctatacttct gtgctttata ttgatatgtg tattcttttg
2581 agattttatt tacatgttgt taataaagtt gcatgctaaa actggtgaaa aaaaaaaaaa
2641 aaaaaaaa
//