LOCUS BC058031 1207 bp mRNA linear HUM 08-OCT-2003
DEFINITION Homo sapiens haptoglobin, mRNA (cDNA clone MGC:61957
IMAGE:4723094), complete cds.
ACCESSION BC058031
VERSION BC058031.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1207)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1207)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: f Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4826761.
FEATURES Location/Qualifiers
source 1..1207
/db_xref="H-InvDB:HIT000259820"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61957 IMAGE:4723094"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1207
/gene="HP"
/db_xref="GeneID:3240"
/db_xref="MIM:140100"
CDS 328..1014
/gene="HP"
/codon_start=1
/product="HP protein"
/protein_id="AAH58031.1"
/db_xref="GeneID:3240"
/db_xref="MIM:140100"
/translation="MVSHHNLTTGATLINEQWLLTTAKNLFLNHSENATAKDIAPTLT
LYVGKKQLVEIEKVVLHPNYSQVDIGLIKLKQKVSVNERVMPICLPSKDYAEVGRVGY
VSGWGRNANFKFTDHLKYVMLPVADQDQCIRHYEGSTVPEKKTPKSPVGVQPILNEHT
FCAGMSKYQEDTCYGDAGSAFAVHDLEEDTWYATGILSFDKSCAVAEYGVYVKVTSIQ
DWVQKTIAEN"
misc_feature 355..990
/gene="HP"
/note="Tryp_SPc; Region: Trypsin-like serine protease"
/db_xref="CDD:smart00020"
BASE COUNT 356 a 261 c 325 g 265 t
ORIGIN
1 gggggctctt ccagaggcaa gaccaaccaa gatgagtgcc ctgggagctg tcattgccct
61 cctgctctgg ggacagcttt ttgcagtgga ctcaggcaat gatgtcacgg atatcgctac
121 cagtgtaaga actactacaa actgcgcaca gaaggagatg gagtgtacac cttaaacaat
181 gggaagcagt ggataaataa ggctgttgga gataaacttc ctgaatgtga agcagtatgt
241 gggaagccca agaatccggc aaacccagtg cagcggatcc tgggtggaca cctggatgcc
301 aaaggcagct ttccctggca ggctaagatg gtttcccacc ataatctcac cacaggtgcc
361 acgctgatca atgaacaatg gctgctgacc acggctaaaa atctcttcct gaaccattca
421 gaaaatgcaa cagcgaaaga cattgcccct actttaacac tctatgtggg gaaaaagcag
481 cttgtagaga ttgagaaggt tgttctacac cctaactact cccaggtaga tattgggctc
541 atcaaactca aacagaaggt gtctgttaat gagagagtga tgcccatctg cctaccttca
601 aaggattatg cagaagtagg gcgtgtgggt tatgtttctg gctgggggcg aaatgccaat
661 tttaaattta ctgaccatct gaagtatgtc atgctgcctg tggctgacca agaccaatgc
721 ataaggcatt atgaaggcag cacagtcccc gaaaagaaga caccgaagag ccctgtaggg
781 gtgcagccca tactgaatga acacaccttc tgtgctggca tgtctaagta ccaagaagac
841 acctgctatg gcgatgcggg cagtgccttt gccgttcacg acctggagga ggacacctgg
901 tatgcgactg ggatcttaag ctttgataag agctgtgctg tggctgagta tggtgtgtat
961 gtgaaggtga cttccatcca ggactgggtt cagaagacca tagctgagaa ctaatgcaag
1021 gctggccgga agcccttgcc tgaaagcaag atttcagcct ggaagagggc aaagtggacg
1081 ggagtggaca ggagtggatg cgataagatg tggtttgaag ctgatgggtg ccagccctgc
1141 attgctgagt caatcaataa agagctttct tttgacacaa aaaaaaaaaa aaaaaaaaaa
1201 aaaaaaa
//