LOCUS BC058015 735 bp mRNA linear HUM 06-JUL-2005
DEFINITION Homo sapiens kalirin, RhoGEF kinase, mRNA (cDNA clone
IMAGE:6497653), partial cds.
ACCESSION BC058015
VERSION BC058015.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 735)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 735)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: j Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5902139.
FEATURES Location/Qualifiers
source 1..735
/db_xref="H-InvDB:HIT000259805"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6497653"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_142"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>735
/gene="KALRN"
/gene_synonym="DUET"
/gene_synonym="duo"
/gene_synonym="TRAD"
/db_xref="GeneID:8997"
/db_xref="MIM:604605"
CDS 144..>735
/gene="KALRN"
/gene_synonym="DUET"
/gene_synonym="duo"
/gene_synonym="TRAD"
/codon_start=1
/product="KALRN protein"
/protein_id="AAH58015.1"
/db_xref="GeneID:8997"
/db_xref="MIM:604605"
/translation="MKGGDRAYTRGPSLGWLFAKCCCCFPCRDAYSHSSSENGGKSES
VANLQAQPSLNSIHSSPGPKRSTNTLKKWLTSPVRRLNSGKADGNIKKQKKVRDGRKS
FDLGSPKPGDETTPQGDSADEKSKKGWGEDEPDEESHTPLPPPMKIFDNDPTQDEMSL
EGSSYRGSLKDPAGCLNEGMAPPTPPKNPKKKKKKKK"
BASE COUNT 190 a 205 c 224 g 116 t
ORIGIN
1 ggggcggccg cggtgcgggg agagcacagc ggggagggcg ggagccggct ctcgggcggc
61 ggcgctgaag tttccttccc gccgcgctct caccccgggc tggcgccccg tgccatgcgg
121 gagcgctggg gcggcggggc aacatgaagg gcggcgacag ggcttacacc cgaggtccct
181 ctttggggtg gctctttgct aagtgctgct gttgcttccc gtgtagagat gcatactctc
241 attcctcaag cgagaatgga ggcaagtccg agtccgtggc caacctgcag gcccagccct
301 ccctgaactc catccacagt tccccgggtc ccaagcgctc caccaacact cttaagaagt
361 ggctgacgag tcctgtgcgt cggcttaaca gcgggaaggc agatggaaac atcaaaaagc
421 agaagaaagt tcgcgatggt cggaagagct ttgacctggg atctcccaag cctggggatg
481 aaacaacccc tcagggagac agcgctgatg agaagagcaa gaaaggttgg ggtgaagatg
541 agccggatga agagtcacac acacccctcc caccacctat gaagattttt gacaacgacc
601 ctacacagga tgaaatgagt ctagaaggaa gctcataccg ggggagcttg aaagaccctg
661 caggctgcct gaatgagggg atggccccac ccacacctcc taaaaaccca aaaaaaaaaa
721 aaaaaaaaaa aaaaa
//