LOCUS BC057816 2186 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens LY6/PLAUR domain containing 5, mRNA (cDNA clone
MGC:71760 IMAGE:30345834), complete cds.
ACCESSION BC057816
VERSION BC057816.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2186)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2186)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: i Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32698975.
FEATURES Location/Qualifiers
source 1..2186
/db_xref="H-InvDB:HIT000259753"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71760 IMAGE:30345834"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2186
/gene="LYPD5"
/gene_synonym="FLJ30469"
/gene_synonym="PRO4356"
/db_xref="GeneID:284348"
/db_xref="HGNC:HGNC:26397"
CDS 197..823
/gene="LYPD5"
/gene_synonym="FLJ30469"
/gene_synonym="PRO4356"
/codon_start=1
/product="LY6/PLAUR domain containing 5"
/protein_id="AAH57816.2"
/db_xref="GeneID:284348"
/db_xref="HGNC:HGNC:26397"
/translation="MKLPSISCPHECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQ
SNADALPPDYSVVRGCTTDKCNAHLMTHDALPNLSQAPDPPTLSGAECYACIGVHQDD
CAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVYIRTCHRPSCTTEGSTSPWTAIDL
QGSCCEGYLCNRKSMTQPFTSASATTPPRALQVLALLLPVLLLVGLSA"
BASE COUNT 558 a 641 c 540 g 447 t
ORIGIN
1 agtaaggaga accagccagg cagaacatca cagcgggagg agctgtccca ggtggcccag
61 ctcagcaatg gcaatggggg tccccagagt cattctgctc tgcctctttg gggctgcact
121 ctgcctgaca gggtcccaag ccctgcagtg ctacagcttt gagcacacct actttggccc
181 ctttgacctc agggccatga agctgcccag catctcctgt cctcatgagt gctttgaggc
241 tatcctgtct ctggacaccg ggtatcgcgc gccggtgacc ctggtgcgga agggctgctg
301 gaccgggcct cctgcgggcc agacgcaatc gaacgcggac gcgctgccgc cagactactc
361 ggtggtgcgc ggctgcacaa ctgacaaatg caacgcccac ctcatgactc atgacgccct
421 ccccaacctg agccaagcac ccgacccgcc gacgctcagc ggcgccgagt gctacgcctg
481 tatcggggtc caccaggatg actgcgctat cggcaggtcc cgacgagtcc agtgtcacca
541 ggaccagacc gcctgcttcc agggcaatgg cagaatgaca gttggcaatt tctcagtccc
601 tgtgtacatc agaacctgcc accggccctc ctgcaccacc gagggcagca ccagcccctg
661 gacagccatc gacctccagg gctcctgctg tgaggggtac ctctgcaaca ggaaatccat
721 gacccagccc ttcaccagtg cttcagccac cacccctccc cgagcactac aggtcctggc
781 cctgctcctc ccagtcctcc tgctggtggg gctctcagca tagaccgccc ctccaggatg
841 ctggggacag ggctcacaca cctcattctt gctgcttcag cccctatcac atagctcact
901 ggaaaatgat gttaaagtaa gaattgcact cctgtccctc tggccttcca tctctcccgc
961 ccttgtgccc cacaacctgg ccaacagtac tggaagaaac tggacacagt caccagcatc
1021 cccggggagg gcaaaacagc catgtcgtgc cctgatgaag agcaattctg atcacagctg
1081 ttactcactg agcaccagcc aggcaccagg caccccataa cacggcttcc tgtgctctcc
1141 ctccagagcc tgtcgcagct ctaggaggga gctatacaat gatgtcttta ttagtgtcat
1201 catgagaagc ccaataagca gtatgcccta acagttagta ggccaggctc tggagctaag
1261 ctgcatgggt tcaaatccca gctccaccat tcagcctgca gagaccatga gcgagttact
1321 taagccaggc tctggagcta agctgcatgg gttcaaatcc cagctccagc attcagccta
1381 cagagaccat gggtgagtta cttaagccag gctctggagc taagctgcat gggttcaaat
1441 cccagctcca ccattcagcc tgcagagact gtgggtgagt tacttgagct ctctgtgcca
1501 atattttctc acctataagg tggaggtgaa aataaactct ataacatgac aagaactact
1561 tcacagtagt tgcagtgagg attcaacgag atgaacattt agtacttggg acacagcagt
1621 ggcccagtgt aaatgggcta cttgtcataa gccctaagtc acaggtcaac aaactgagag
1681 gcaaaagcac ttggttgagc ttgtgtatct agtgagtatg gattcaggga ccagattccc
1741 agccccacga actgctaagc aaccccacct cctaaacaca tgagtgccga ttaacttcac
1801 agaaaaacac acaaggcaaa gttcagcgag gtgaaattct ccaagctata aagatcaggg
1861 aagacttcct ggaggaattc acccttgagc aaaatcctaa aggatcaata gtagctggca
1921 aaaagaagca ggaggaagcg cattctaggt agaggagaca gcctggacaa aggtctgagg
1981 gaggaaggag cacaaggagt gcaggacact ttcatgagtg caggacactt tcataactgc
2041 atgaacttca tagagatggg atcctttagc atgttctctg tgcacatgct tgaccatgtt
2101 ctttcacatg ctttttgcca cttgatcttt ccagcaactc agtgagagaa gcaaaaaagt
2161 aagttgcatc caaaaaaaaa aaaaaa
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