LOCUS BC057810 1532 bp mRNA linear HUM 22-FEB-2007
DEFINITION Homo sapiens tubulin, alpha 3d, mRNA (cDNA clone MGC:71736
IMAGE:5268074), complete cds.
ACCESSION BC057810
VERSION BC057810.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1532)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1532)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: m Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58743305.
FEATURES Location/Qualifiers
source 1..1532
/db_xref="H-InvDB:HIT000259747"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71736 IMAGE:5268074"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1532
/gene="TUBA3D"
/gene_synonym="H2-ALPHA"
/db_xref="GeneID:113457"
/db_xref="HGNC:HGNC:24071"
CDS 80..1432
/gene="TUBA3D"
/gene_synonym="H2-ALPHA"
/codon_start=1
/product="tubulin, alpha 3d"
/protein_id="AAH57810.1"
/db_xref="GeneID:113457"
/db_xref="HGNC:HGNC:24071"
/translation="MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGG
GDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANN
YARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVD
YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD
IERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVI
SAEKAYHEQLSVAEITNACFEPANQMVKYDPRHGKYMACCMLYRGDVVPKDVNAAIAT
IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEAEAEEGEEY
"
BASE COUNT 346 a 432 c 447 g 307 t
ORIGIN
1 gttgcagttg ggcgctcagc agctgtggca gccggttgag gtctggcagt agcgttgggc
61 tgaagcagcg gagttcgcca tgcgcgagtg tatctctatc cacgtggggc aggcgggtgt
121 ccagatcggc aatgcctgct gggaactgta ctgccttgaa catggaattc agcccgatgg
181 ccaaatgcca agtgataaaa ccattggtgg cggggacgac tccttcaaca cgttcttcag
241 tgagactgga gctggcaagc acgtgcccag agcagtgttt gtggacctgg agcccactgt
301 ggtcgatgaa gtgcgcacag ggacctacag gcagctcttc cacccggagc agctgatcac
361 cgggaaggaa gatgcagcca ataattacgc caggggccat tacaccatcg gcaaggagat
421 tgttgaccta gtcctggacc ggatccgcaa actggcggat ctgtgcacag gactgcaggg
481 cttcctcatc ttccacagct ttgggggcgg cactggctct gggttcgcat ctctgctcat
541 ggagcggctc tcagtggatt acggcaagaa gtccaagcta gagtttgcca tttacccagc
601 cccccaggtc tccacagccg tggtggagcc ctacaactcc atcctgacca cccacacgac
661 cctggaacat tctgactgtg ccttcatggt cgacaatgaa gccatctatg acatatgtcg
721 gcgcaacctg gacattgaac gtcccacgta caccaacctc aatcgcctga ttgggcagat
781 cgtgtcctcc atcacagcct ccctgcgatt tgatggggcc ctgaatgtgg acttgacgga
841 attccagacc aacctagtgc cgtacccccg catccacttc cccctggcca cctatgcccc
901 agtcatctca gctgagaagg cctaccacga gcagctgtct gtggccgaga tcaccaatgc
961 ctgcttcgag ccagccaatc aaatggtcaa gtatgaccct cgccacggca agtacatggc
1021 ctgctgcatg ttgtacaggg gggacgtggt ccccaaagac gtcaacgcgg ccatcgccac
1081 catcaagacc aagcgcacca tccagtttgt ggattggtgc ccgactggat ttaaggtggg
1141 cattaactac cagcccccca cagtggtccc cgggggagac ctggccaagg tgcagcgggc
1201 cgtgtgcatg ctgagcaaca ccacggccat tgcggaggcc tgggcccgcc tggaccataa
1261 gttcgatctc atgtatgcca agcgggcctt tgtgcactgg tacgtgggcg aaggcatgga
1321 agagggagag ttctctgagg cccgcgagga cctggcagct ctagagaagg attatgaaga
1381 ggtgggcgtg gattccgtgg aagctgaggc tgaagaaggc gaagaatact gaggggaggg
1441 tgtggtgggt tctcccctgc cacccccggg atggctgctt ccaagttgtt tgcaattaaa
1501 ggttctgtat aaaaccaaaa aaaaaaaaaa aa
//