LOCUS BC057803 1531 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens heparan sulfate (glucosamine) 3-O-sulfotransferase 1,
mRNA (cDNA clone MGC:71699 IMAGE:5261530), complete cds.
ACCESSION BC057803
VERSION BC057803.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1531)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1531)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: m Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52426776.
FEATURES Location/Qualifiers
source 1..1531
/db_xref="H-InvDB:HIT000259740"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71699 IMAGE:5261530"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1531
/gene="HS3ST1"
/gene_synonym="3OST"
/gene_synonym="3OST1"
/db_xref="GeneID:9957"
/db_xref="HGNC:HGNC:5194"
/db_xref="MIM:603244"
CDS 306..1229
/gene="HS3ST1"
/gene_synonym="3OST"
/gene_synonym="3OST1"
/codon_start=1
/product="heparan sulfate (glucosamine)
3-O-sulfotransferase 1"
/protein_id="AAH57803.1"
/db_xref="GeneID:9957"
/db_xref="HGNC:HGNC:5194"
/db_xref="MIM:603244"
/translation="MAALLLGAVLLVAQPQLVPSRTAELGQQELLRKAGTLQDDVRDG
VAPNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSHGLGW
YLSQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERVLSDYTQV
FYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGD
RLIRDPFPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGRDRCLHESKGRAHPQ
VDPKLLNKLHEYFHEPNKKFFELVGRTFDWH"
BASE COUNT 359 a 453 c 392 g 327 t
ORIGIN
1 cctctgcgcc ctggcagcca ggagtcgccg ccacgaccac cgggtctcag tgggtgcctg
61 cgccttctcc ccgcccgcct gcccagggcc atccagaaac ttgctctacc cgccgcgggt
121 gctcggcagt gctgcccatg gcccagccca ggagcctatt tagggcgccg gacgggctgg
181 acagaggcgc ggctgagtaa ttgaaggcct gaaacgccca tgtgccactg actaggaggc
241 ttccctgctg cggcacttca tgacccagcg gcgcgcggcc cagtgaagcc accgtggtgt
301 ccagcatggc cgcgctgctc ctgggcgcgg tgctgctggt ggcccagccc cagctagtgc
361 cttcccgcac cgccgagcta ggccagcagg agcttctgcg gaaagcgggg accctccagg
421 atgacgtccg cgatggcgtg gccccaaacg gctctgccca gcagttgccg cagaccatca
481 tcatcggcgt gcgcaagggc ggcacgcgcg cactgctgga gatgctcagc ctgcaccccg
541 acgtggcggc cgcggagaac gaggtccact tcttcgactg ggaggagcat tacagccacg
601 gcttgggctg gtacctcagc cagatgccct tctcctggcc acaccagctc acagtggaga
661 agacccccgc gtatttcacg tcgcccaaag tgcctgagcg agtctacagc atgaacccgt
721 ccatccggct gctgctcatc ctgcgagacc cgtcggagcg cgtgctatct gactacaccc
781 aagtgttcta caaccacatg cagaagcaca agccctaccc gtccatcgag gagttcctgg
841 tgcgcgatgg caggctcaat gtggactaca aggccctcaa ccgcagcctc taccacgtgc
901 acatgcagaa ctggctgcgc tttttcccgc tgcgccacat ccacattgtg gacggcgacc
961 gcctcatcag ggaccccttc cctgagatcc aaaaggtcga gaggttccta aagctgtcgc
1021 cgcagatcaa tgcttcgaac ttctacttta acaaaaccaa gggcttttac tgcctgcggg
1081 acagcggccg ggaccgctgc ttacatgagt ccaaaggccg ggcgcacccc caagtcgatc
1141 ccaaactact caataaactg cacgaatatt ttcatgagcc aaataagaag ttcttcgagc
1201 ttgttggcag aacatttgac tggcactgat ttgcaataag ctaagctcag aaactttcct
1261 actgtaagtt ctggtgtaca tctgagggga aaaagaattt taaaaaagca tttaaggtat
1321 aatttatttg taaaatccat aaagtacttc tgtacagtat tagattcaca attgccatat
1381 atactagtta tatttttcta cttgttaaat ggagggcatt ttgtattgtt tttcatggtt
1441 gttaacattg tgtaatatgt ctctatatga aggaactaaa ctatttcact gaaaaaaaaa
1501 aaaagatttt ttctgaaaaa aaaaaaaaaa a
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