LOCUS BC057788 2255 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens matrix metallopeptidase 11 (stromelysin 3), mRNA (cDNA
clone MGC:71622 IMAGE:30348138), complete cds.
ACCESSION BC057788
VERSION BC057788.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2255)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2255)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: j Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58331147.
FEATURES Location/Qualifiers
source 1..2255
/db_xref="H-InvDB:HIT000259726"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71622 IMAGE:30348138"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2255
/gene="MMP11"
/gene_synonym="SL-3"
/gene_synonym="ST3"
/db_xref="GeneID:4320"
/db_xref="HGNC:HGNC:7157"
/db_xref="MIM:185261"
CDS 2..1468
/gene="MMP11"
/gene_synonym="SL-3"
/gene_synonym="ST3"
/codon_start=1
/product="matrix metallopeptidase 11 (stromelysin 3)"
/protein_id="AAH57788.1"
/db_xref="GeneID:4320"
/db_xref="HGNC:HGNC:7157"
/db_xref="MIM:185261"
/translation="MAPAAWLRSAAARALLPPMLLLLLQPPPLLARALPPDAHHLHAE
RRGPQPWHAALPSSPAPAPATQEAPRPASSLRPPRCGVPDPSDGLSARNRQKRFVLSG
GRWEKTDLTYRILRFPWQLVQEQVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFA
RYWHGDDLPFDGPGGILAHAFSPKTHREGDVHFDYDETWTIGDDQGTDLLQVAAHEFG
HVLGLQHTTAAKALMSAFYTFRYPLSLSPDDCRGVQHLYGQPWPTVTSRTPALGPQAG
IDTNEIAPLEPDAPPDACEASFDAVSTIRGELFFFKAGFVWRLRGGQLQPGYPALASR
HWQGLPSPVDAAFEDAQGHIWFFQGAQYWVYDGEKPVLGPAPLTELGLVRFPVHAALV
WGPEKNKIYFFRGRDYWRFHPSTRRVDSPVPRRATDWRGVPSEIDAAFQDADGYAYFL
RGRLYWKFDPVKVKALEGFPRLVGPDFFGCAEPANTFL"
BASE COUNT 408 a 715 c 669 g 463 t
ORIGIN
1 gatggctccg gccgcctggc tccgcagcgc ggccgcgcgc gccctcctgc ccccgatgct
61 gctgctgctg ctccagccgc cgccgctgct ggcccgggct ctgccgccgg acgcccacca
121 cctccatgcc gagaggaggg ggccacagcc ctggcatgca gccctgccca gtagcccggc
181 acctgcccct gccacgcagg aagccccccg gcctgccagc agcctcaggc ctccccgctg
241 tggcgtgccc gacccatctg atgggctgag tgcccgcaac cgacagaaga ggttcgtgct
301 ttctggcggg cgctgggaga agacggacct cacctacagg atccttcggt tcccatggca
361 gttggtgcag gagcaggtgc ggcagacgat ggcagaggcc ctaaaggtat ggagcgatgt
421 gacgccactc acctttactg aggtgcacga gggccgtgct gacatcatga tcgacttcgc
481 caggtactgg catggggacg acctgccgtt tgatgggcct gggggcatcc tggcccatgc
541 cttctccccc aagactcacc gagaagggga tgtccacttc gactatgatg agacctggac
601 tatcggggat gaccagggca cagacctgct gcaggtggca gcccatgaat ttggccacgt
661 gctggggctg cagcacacaa cagcagccaa ggccctgatg tccgccttct acacctttcg
721 ctacccactg agtctcagcc cagatgactg caggggcgtt caacacctat atggccagcc
781 ctggcccact gtcacctcca ggaccccagc cctgggcccc caggctggga tagacaccaa
841 tgagattgca ccgctggagc cagacgcccc gccagatgcc tgtgaggcct cctttgacgc
901 ggtctccacc atccgaggcg agctcttttt cttcaaagcg ggctttgtgt ggcgcctccg
961 tgggggccag ctgcagcccg gctacccagc attggcctct cgccactggc agggactgcc
1021 cagccctgtg gacgctgcct tcgaggatgc ccagggccac atttggttct tccaaggtgc
1081 tcagtactgg gtgtacgacg gtgaaaagcc agtcctgggc cccgcacccc tcaccgagct
1141 gggcctggtg aggttcccgg tccatgctgc cttggtctgg ggtcccgaga agaacaagat
1201 ctacttcttc cgaggcaggg actactggcg tttccacccc agcacccggc gtgtagacag
1261 tcccgtgccc cgcagggcca ctgactggag aggggtgccc tctgagatcg acgctgcctt
1321 ccaggatgct gatggctatg cctacttcct gcgcggccgc ctctactgga agtttgaccc
1381 tgtgaaggtg aaggctctgg aaggcttccc ccgtctcgtg ggtcctgact tctttggctg
1441 tgccgagcct gccaacactt tcctctgacc atggcttgga tgccctcagg ggtgctgacc
1501 cctgccaggc cacgaatatc aggctagaga cccatggcca tctttgtggc tgtgggcacc
1561 aggcatggga ctgagcccat gtctcctcag ggggatgggg tggggtacaa ccaccatgac
1621 aactgccggg agggccacgc aggtcgtggt cacctgccag cgactgtctc agactgggca
1681 gggaggcttt ggcatgactt aagaggaagg gcagtcttgg gcccgctatg caggtcctgg
1741 caaacctggc tgccctgtct ccatccctgt ccctcagggt agcaccatgg caggactggg
1801 ggaactggag tgtccttgct gtatccctgt tgtgaggttc cttccagggg ctggcactga
1861 agcaagggtg ctggggcccc atggccttca gccctggctg agcaactggg ctgtagggca
1921 gggccacttc ctgaggtcag gtcttggtag gtgcctgcat ctgtctgcct tctggctgac
1981 aatcctggaa atctgttctc cagaatccag gccaaaaagt tcacagtcaa atggggaggg
2041 gtattcttca tgcaggagac cccaggccct ggaggctgca acatacctca atcctgtccc
2101 aggccggatc ctcctgaagc ccttttcgca gcactgctat cctccaaagc cattgtaaat
2161 gtgtgtacag tgtgtataaa ccttcttctt cttttttttt ttttaaactg aggattgtca
2221 ttaaacacag ttgttttcta aaaaaaaaaa aaaaa
//