LOCUS BC057237 1666 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens actin related protein 2/3 complex, subunit 5, 16kDa,
mRNA (cDNA clone MGC:62039 IMAGE:3931697), complete cds.
ACCESSION BC057237
VERSION BC057237.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1666)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1666)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: a Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1666
/db_xref="H-InvDB:HIT000259662"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:62039 IMAGE:3931697"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_62"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1666
/gene="ARPC5"
/gene_synonym="ARC16"
/gene_synonym="dJ127C7.3"
/gene_synonym="p16-Arc"
/db_xref="GeneID:10092"
/db_xref="HGNC:HGNC:708"
/db_xref="MIM:604227"
CDS 103..567
/gene="ARPC5"
/gene_synonym="ARC16"
/gene_synonym="dJ127C7.3"
/gene_synonym="p16-Arc"
/codon_start=1
/product="ARPC5 protein"
/protein_id="AAH57237.1"
/db_xref="GeneID:10092"
/db_xref="HGNC:HGNC:708"
/db_xref="MIM:604227"
/translation="MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEVDS
CLRHSITGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLD
KNGVDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVLTARKTV"
BASE COUNT 498 a 299 c 383 g 486 t
ORIGIN
1 gggggggaag tgaatcaggc gccgggtagt gggttgctgg gctgggcttg ctgaggtaga
61 ggcagcgcca agaagaggcc tttgccgctg gtcgggattg ggatgtcgaa gaacacagtg
121 tcgtcggccc gcttccggaa ggtggacgtg gatgaatatg acgagaacaa gttcgtggac
181 gaagaagatg ggggcgacgg ccaggccggg cccgacgagg gcgaggtgga ttcctgcctg
241 cggcattcca tcacaggaaa catgacagct gccctacagg cagctctgaa gaacccccct
301 atcaacacca agagtcaggc agtgaaggac cgggcaggca gcattgtctt gaaggtgctc
361 atctctttta aagctaatga tatagaaaag gcagttcaat ctctggacaa gaatggtgtg
421 gatctcctaa tgaagtatat ttataaagga tttgagagcc cgtctgacaa tagcagtgct
481 atgttactgc aatggcatga aaaggcactt gctgctggag gagtagggtc cattgttcgt
541 gtcttgactg caagaaaaac tgtgtagtct ggcaggaagt ggattatctg cctcgggagt
601 gggaattgct ggtacaaaga ccaaaacaac caaatgccac cgctgccctg tgggtagcat
661 ctgtttctct cagctttgcc ttcttgcttt ttcatatctg taaagaaaaa aattacatat
721 cagttgtcct ttaatgaaaa ttgggataat atagaagaaa ttgtgttaaa atagaagtgt
781 ttcatccttt caaaaccatt tcagtgatgt ttataccaat ctgtatatag tataatttac
841 attcaagttt aattgtgcaa cttttaaccc ctgttggctg gttttttgtt ctgttttgtt
901 ttgtattatt tttaactaat actgagagat ttggtcagaa tttgaggcca gtttcctagc
961 tcattgctag tcaggaaatg atatttataa aaaatatgag agactggcag ctattaacat
1021 tgcaaaactg gaccatattt cccttattta ataagcaaaa tatgtttttg gaataagtgg
1081 tgggtgaata ccactgccaa gttatagctt tgtttttgct tgcctcctga ttatctgtac
1141 tgtgggttta agtatgctac tttctctcag catccaataa tcatggcccc tcaatttatt
1201 tgtggtcacc cagggttcag agcaagaagt cttgctttat acaaatgtat ccataaaata
1261 tcagagcttg ttgggcatga acatcaaact tttgttccac taatatggct ctgtttggaa
1321 aaaactgcaa atcagaaaga atgatttgca gaaagaaaga aaaactatgg tgtaatttaa
1381 actctgggca gcctctgaat gaaatgctac tttctttaga aatataatag ctgccttaga
1441 cattatgagg tatacaacta gtatttaaga taccatttaa tatgccccgt aaatgtcttc
1501 agtgttcttc agggtagttg ggatctcaaa agatttggtt cagatccaaa caaatacaca
1561 ttctgtgttt tagctcagtg ttttctaaaa aaagaaactg ccacacagca aaaaattgtt
1621 tactttgttg gacaaaccaa aaaaaaaaaa aaaaaaaaaa acatgt
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