LOCUS BC056680 1399 bp mRNA linear HUM 06-APR-2004
DEFINITION Homo sapiens AT rich interactive domain 5B (MRF1-like), mRNA (cDNA
clone IMAGE:4248986), partial cds.
ACCESSION BC056680
VERSION BC056680.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1399)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1399)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: b Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1399
/db_xref="H-InvDB:HIT000259576"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4248986"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
BASE COUNT 466 a 310 c 330 g 293 t
ORIGIN
1 ggggaacgtc gagatggagc ccaactcact ccagtgggtc ggctcaccgt gtggcttgca
61 cggaccttac attttctaca aggcttttca attccacctt gaaggcaaac caagaatttt
121 gtcccttggc gactttttct ttgtaagatg tacgccaaag gatccgattt gcatagcgga
181 gctccagctg ttgtgggaag agaggaccag ccggcaactt ttatccagct ctaaacttta
241 tttcctccca gaagacactc cccagggcag aaatagcgac catggcgagg atgaagtcat
301 tgctgtttcc gaaaaggtga ttgtgaagct tgaagacctg gtcaagtggg tacattctga
361 tttctccaag tggagatgtg gcttccacgc tggaccagtg aaaactgagg ccttgggaag
421 gaatggacag aaggaagctc tgctgaagta caggcagtca accctaaaca gtggactcaa
481 cttcaaagac gttctcaagg agaaggcaga cctgggggag gacgaggaag aaacgaacgt
541 gatagttctc agctaccccc agtactgccg gtaccgctcg atgctgaaac gcatccagga
601 taagccatct tccattctaa cggaccagtt tgcattggcc ctggggggca ttgcagtggt
661 cagcaggaac cctcagatcc tgtactgtcg ggacaccttt gaccacccga ctctcataga
721 aaacgagagt atatgcgatg agtttgcgcc aaatcttaaa ggcagaccac gcaaaaagaa
781 accatgccca caaagaagag attcattcag tggtgttaag gattccaaca acaattccga
841 tggcaaagcc gttgccaagg tgaaatgtga ggccaggtca gccttgacca agccgaagaa
901 taaccataac tgtaaaaaag tctcaaatga agaaaaacca aaggttgcca ttggtgaaga
961 gtgcagggca gatgaacaag ccttcttggt ggcactttat aaatacatga aagaaaggaa
1021 aacgccgata gaacgaatac cctatttagg ttttaaacag attaaccttt ggactatgtt
1081 tcaagctgct caaaaactgg gaggatatga aacaataaca gcccgccgtc agtggaaaca
1141 tatttatgat gaattaggcg gtaatcctgg gagcaccagc gctgccactt gtacccgcag
1201 acattatgaa agattaatcc taccatatga aagatttatt aaaggagaag aagataagcc
1261 cctgcctcca atcaaacctc ggaaacagga gaacagttca caggaaaatg agaacaaaac
1321 aaaagtatct ggaaccaaac gcatcaaaca tgaaatacct aaaagcaaaa aaaaaaaaaa
1381 aaaaaaaaaa aaaaacatg
//