LOCUS BC056678 1113 bp mRNA linear HUM 05-NOV-2003
DEFINITION Homo sapiens adenosine monophosphate deaminase 1 (isoform M), mRNA
(cDNA clone IMAGE:4271545), partial cds.
ACCESSION BC056678
VERSION BC056678.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1113)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1113)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: b Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557310.
FEATURES Location/Qualifiers
source 1..1113
/db_xref="H-InvDB:HIT000259574"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4271545"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1113
/gene="AMPD1"
/gene_synonym="MADA"
/db_xref="GeneID:270"
/db_xref="MIM:102770"
CDS 77..>1113
/gene="AMPD1"
/gene_synonym="MADA"
/codon_start=1
/product="AMPD1 protein"
/protein_id="AAH56678.1"
/db_xref="GeneID:270"
/db_xref="MIM:102770"
/translation="MPLFKLPAEEKQIDDAMRNFAEKVFASEVKDEGGRQEISPFDVD
EICPISHHEMQAHIFHLETLSTSTEARRKKRFQGRKTVNLSIPLSETSSTKLSHIDEY
ISSSPTYQTVPDFQRVQITGDYASGVTVEDFEIVCKGLYRALCIREKYMQKSFQRFPK
TPSKYLRNIDGEAWVANESFYPVFTPPVKKGEDPFRTDNLPENLGYHLKMKDGVVYVY
PNEAAVSKDEPKPLPYPNLDTFLDDMNFLLALIAQGPVKTYTHRRLKFLSSKFQVHQM
LNEMDELKELKNNPHRDFYNCRKVDTHIHAAACMNQKHLLRFIKKSYQIDADRVVYST
KKKKKKKKKKHV"
misc_feature 962..1078
/gene="AMPD1"
/gene_synonym="MADA"
/note="A_deaminase; Region: Adenosine/AMP deaminase"
/db_xref="CDD:pfam00962"
BASE COUNT 339 a 265 c 224 g 285 t
ORIGIN
1 ggggagtcag tcaccccaca gtctcctctc tcttcttttc tactgtgcta tcctagaatc
61 taggatttca gcaacaatgc ctctgttcaa actcccagct gaagagaaac aaattgatga
121 tgcaatgcgc aactttgctg aaaaagtgtt tgcctctgaa gtcaaagatg aaggaggtcg
181 tcaggagatt tccccctttg atgtggatga gatctgtccg atttctcatc atgagatgca
241 agcacacata ttccatctgg agactctgtc cacctccaca gaagccagga gaaaaaagcg
301 tttccaagga cggaagactg ttaatttgtc cattccacta agtgaaacat cttccaccaa
361 actgtcccac attgatgaat acatttcctc atctccaacc taccagaccg tgcctgattt
421 tcagagagtg cagattactg gtgactatgc ctctggggtt acagttgaag attttgaaat
481 tgtttgcaaa ggtctgtatc gggcactatg catacgtgag aaatacatgc agaagtcgtt
541 tcagaggttc cctaaaaccc cttccaaata cttgcggaac attgatggtg aggcttgggt
601 agcaaatgag agcttctatc cagtctttac tcctcctgtg aagaagggag aggacccctt
661 ccgaacagac aaccttcctg aaaacctggg ctatcacctc aaaatgaagg acggtgtagt
721 ttacgtctat cctaatgaag cagcagtcag caaagatgag cctaagccac ttccttaccc
781 aaatctggac accttcttag acgatatgaa ttttttactt gctttaattg ctcaaggacc
841 tgttaagacc tatacccacc ggcgcctgaa gttcctctcc tccaagttcc aggtccatca
901 gatgcttaac gagatggacg agttaaagga gctgaaaaac aacccccacc gagattttta
961 taactgcagg aaggtggaca cccatatcca tgcagccgct tgcatgaacc agaaacatct
1021 gctgcgtttt attaagaaat cttaccaaat tgatgctgac agagtggtct atagcaccaa
1081 aaaaaaaaaa aaaaaaaaaa aaaaaaaaca tgt
//