LOCUS BC056404 1916 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens choline kinase beta, mRNA (cDNA clone IMAGE:5755349),
with apparent retained intron.
ACCESSION BC056404
VERSION BC056404.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1916)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1916)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: i Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23238259
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1916
/db_xref="H-InvDB:HIT000259549"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5755349"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 459 a 525 c 550 g 382 t
ORIGIN
1 ggaaccgagc ccgtccgaag ggagcggagc gcagcctggc ctggggcccg gtcgagcccg
61 cgccatggcg gccgaggcga cagctgtggc cggaagcggg gctgttggcg gctgcctggc
121 caaagacggc ttgcagcagt ctaagtgccc ggacactacc ccaaaacggc ggcgcgcctc
181 gtcgctgtcg cgtgacgccg agcgccgagc ctaccaatgg tgccgggagt acttgggcgg
241 ggcctggcgc cgagtgcagc ccgaggagct gagggtttac cccgtgagcg gaggcctcag
301 caacctgctc ttccgctgct cgctcccgga ccacctgccc agcgttggcg aggagccccg
361 ggaggtgctt ctgcggctgt acggagccat cttgcaggtg aggggggtgt gagcgccgca
421 gcaccagtgg ctttagggcc tgtcgcttac gcgatgcggg tagtattgtt cccgttgcgc
481 agttgaggac accgaggttc acggtctgag taacacctca ttacaccgaa gcctgggcct
541 gtattcccag agctttggga ggctgaggcg agaggatcac ttgagcacag gagttggaga
601 ccagcctgga caacatagtg agacccccat ctctaaataa aaatagacca acgctaaagc
661 ctgtgctcca gagcctccag gcaattggat cagaagtcgc agctctggtg ggaggaaggc
721 gagccctcat gtgtgtccct gtgccacttt gccttggccc ctttgctgtc catccttttt
781 cagggcgtgg actccctggt gctagaaagc gtgatgttcg ccatacttgc ggagcggtcg
841 ctggggcccc agctgtacgg agtcttccca gagggccggc tggaacagta catcccaagt
901 cggccattga aaactcaaga gcttcgagag ccagtgttgt cagcagccat tgccacgaag
961 atggcgcaat ttcatggcat ggagatgcct ttcaccaagg agccccactg gctgtttggg
1021 accatggagc ggtacctaaa acagatccag gacctgcccc caactggcct ccctgagatg
1081 aacctgctgg agatgtacag cctgaaggat gagatgggca acctcaggaa gttactagag
1141 tctaccccat cgccagtcgt cttctgccac aatgacatcc aggaagggaa catcttgctg
1201 ctctcagagc cagaaaatgc tgacagcctc atgctggtgg acttcgagta cagcagttat
1261 aactataggg gctttgacat tgggaaccat ttttgtgagt gggtttatga ttatactcac
1321 gaggaatggc ctttctacaa agcaaggccc acagactacc ccactcaaga acagcagttg
1381 cattttattc gtcattacct ggcagaggca aagaaaggtg agaccctctc ccaagaggag
1441 cagagaaaac tggaagaaga tttgctggta gaagtcagtc ggtatgctct ggcatcccat
1501 ttcttctggg gtctgtggtc catcctccag gcatccatgt ccaccataga atttggttac
1561 ttggactatg cccagtctcg gttccagttc tacttccagc agaaggggca gctgaccagt
1621 gtccactcct catcctgact ccaccctccc actccttgga tttctcctgg agcctccagg
1681 gcaggacctt ggagggagga acaacgagca gaaggccctg gcgactgggc tgagccccca
1741 agtgaaactg aggttcagga gaccggcctg ttcctgagtt tgagtaggtc cccatggctg
1801 gcaggccaga gccccgtgct gtgtatgtaa cacaataaac aagcttcttc ttcccaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
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