LOCUS BC056259 1490 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens serpin peptidase inhibitor, clade A (alpha-1
antiproteinase, antitrypsin), member 6, mRNA (cDNA clone MGC:61961
IMAGE:5810260), complete cds.
ACCESSION BC056259
VERSION BC056259.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1490)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1490)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: g Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4580418.
FEATURES Location/Qualifiers
source 1..1490
/db_xref="H-InvDB:HIT000054151"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61961 IMAGE:5810260"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_127"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1490
/gene="SERPINA6"
/db_xref="GeneID:866"
/db_xref="HGNC:HGNC:1540"
/db_xref="MIM:122500"
CDS 80..1297
/gene="SERPINA6"
/codon_start=1
/product="serpin peptidase inhibitor, clade A (alpha-1
antiproteinase, antitrypsin), member 6"
/protein_id="AAH56259.1"
/db_xref="GeneID:866"
/db_xref="HGNC:HGNC:1540"
/db_xref="MIM:122500"
/translation="MPLLLYTCLLWLPTSGLWTVQAMDPNAAYVNMSNHHRGLASANV
DFAFSLYKHLVALSPKKNIFISPVSISMALAMLSLGTCGHTRAQLLQGLGFNLTERSE
TEIHQGFQHLHQLFAKSDTSLEMTMGNALFLDGSLELLESFSADIKHYYESEVLAMNF
QDWATASRQINSYVKNKTQGKIVDLFSGLDSPAILVLVNYIFFKGTWTQPFDLASTRE
ENFYVDETTVVKVPMMLQSSTISYLHDAELPCQLVQMNYVGNGTVFFILPDKGKMNTV
IAALSRDTINRWSAGLTSSQVDLYIPKVTISGVYDLGDVLEEMGIADLFTNQANFSRI
TQDAQLKSSKVVHKAVLQLNEEGVDTAGSTGVTLNLTSKPIILRFNQPFIIMIFDHFT
WSSLFLARVMNPV"
BASE COUNT 378 a 420 c 362 g 330 t
ORIGIN
1 ggggagggtc caggacagca ggaccaagcc agcagaaaca gcctgagccc accgcagact
61 ggcctggcta tactggacaa tgccactcct cctgtacacc tgtcttctct ggctgcccac
121 cagcggcctc tggaccgtcc aggccatgga tcctaacgct gcttatgtga acatgagtaa
181 ccatcaccgg ggcctggctt cagccaacgt tgactttgcc ttcagcctgt ataagcacct
241 agtggccttg agtcccaaaa agaacatttt catctcccct gtgagcatct ccatggcctt
301 agctatgctg tccctgggca cctgtggcca cacacgggcc cagcttctcc agggcctggg
361 tttcaacctc actgagaggt ctgagactga gatccaccag ggtttccagc acctgcacca
421 actctttgca aagtcagaca ccagcttaga aatgaccatg ggcaatgcct tgtttcttga
481 tggcagcctg gagttgctgg agtcattctc agcagacatc aagcactact atgagtcaga
541 ggtcttggct atgaatttcc aggactgggc aacagccagc agacagatca acagctatgt
601 caagaataag acacagggga aaattgtcga cttgttttca gggctggata gcccagccat
661 cctcgtcctg gtcaactata tcttcttcaa aggcacatgg acacagccct ttgacctggc
721 aagcaccagg gaggagaact tctatgtgga cgagacaact gtggtgaagg tgcccatgat
781 gttgcagtcg agcaccatca gttaccttca tgacgcggag ctcccctgcc agctggtgca
841 gatgaactac gtgggcaatg ggactgtctt cttcatcctt ccggacaagg ggaagatgaa
901 cacagtcatc gctgcactga gccgggacac gattaacagg tggtccgcag gcctgaccag
961 cagccaggtg gacctgtaca ttccaaaggt caccatctct ggagtctatg acctcggaga
1021 tgtgctggag gaaatgggca ttgcagactt gttcaccaac caggcaaatt tctcacgcat
1081 cacccaggac gcccagctga agtcatcaaa ggtggtccat aaagctgtgc tgcaactcaa
1141 tgaggagggt gtggacacag ctggctccac tggggtcacc ctaaacctga cgtccaagcc
1201 tatcatcttg cgtttcaacc agcccttcat catcatgatc ttcgaccact tcacctggag
1261 cagccttttc ctggcgaggg ttatgaaccc agtgtaagag accacccacc cagagcctca
1321 gcactgtctg actttgggaa ccagggatcc cacagaaatg ttttggagag cgggaggttt
1381 cccccaatct cctccaagtt cttctccctc caaccagagt tgtgtctaac tttaggcatc
1441 ttttaataaa tgtcattgcg actctaaaaa aaaaaaaaaa aaaaaaaaaa
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