LOCUS BC056207 1178 bp mRNA linear HUM 03-NOV-2005
DEFINITION Homo sapiens leucine rich repeat containing 4B, mRNA (cDNA clone
IMAGE:5289062), partial cds.
ACCESSION BC056207
VERSION BC056207.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1178)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1178)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: h Column: 17.
FEATURES Location/Qualifiers
source 1..1178
/db_xref="H-InvDB:HIT000259524"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5289062"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..1178
/gene="LRRC4B"
/gene_synonym="DKFZp761A179"
/gene_synonym="HSM"
/db_xref="GeneID:94030"
/db_xref="HGNC:HGNC:25042"
/db_xref="IMGT/GENE-DB:25042"
/db_xref="MIM:25042"
CDS <1..486
/gene="LRRC4B"
/gene_synonym="DKFZp761A179"
/gene_synonym="HSM"
/codon_start=1
/product="LRRC4B protein"
/protein_id="AAH56207.1"
/db_xref="GeneID:94030"
/db_xref="HGNC:HGNC:25042"
/db_xref="IMGT/GENE-DB:25042"
/db_xref="MIM:25042"
/translation="FTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAF
YKLRKQHQLHKHHGPTRTVEIINVEDELPAASAVSVAAAATAASGGGVGGDSHLALPA
LERDHLNHHHYVAAAFKAHYSSNPSGGGCGGKGPPGLNSIHEPLLFKSGSKENVQETQ
I"
BASE COUNT 236 a 412 c 341 g 189 t
ORIGIN
1 ttcacggtgc ccatcacgga tgtgacggag aacgccctca aggacctgga cgacgtcatg
61 aagaccacca aaatcattat cggctgcttc gtggccatca cgttcatggc cgcggtgatg
121 ctcgtggcct tctacaagct gcgcaagcag caccagctcc acaagcacca cgggcccacg
181 cgcaccgtgg agatcatcaa cgtggaggac gagctgcccg ccgcctcggc cgtgtccgtg
241 gccgccgcgg ccaccgcggc cagtgggggt ggtgtgggcg gggacagcca cctggccctg
301 cccgccctgg agcgagacca cctcaaccac caccactacg tggctgccgc cttcaaggcg
361 cactacagca gcaaccccag cggcgggggc tgcgggggca aaggcccgcc cggcctcaac
421 tccatccacg aacctctgct cttcaagagc ggctccaagg agaacgtgca agagacgcag
481 atctgaggcg gcggggccgg gcgggcgagg ggcgtggagc cccccaccca ggtcccagcc
541 cgggcgcagc ctgaccggga cccctccctc ccacagccca gcccaccttc tgggaccacg
601 cagggaattg gggagaggtg gcttccagcc ccatctgggg ctcggacccc cagtaaggac
661 agggtggggc tccaggagcg gagtctctgg gatcctcgcc tcacccccgc caatccccgg
721 tgacgggagg ggacgtggga cccaggagaa gtggcctgag ttctccgcgt ttcctcctcg
781 ctctcccacc aagcgttccg ggcccgccgc cttccagggg agagaggagc tttctccagg
841 ggtgtccttt cccctcggcc ccaaacacct tccttttacg gttcagtttt tgcagtttga
901 cgcccgtccc tccctcccac tcctccgccc tcaaaactga agagatggac acgtcgccag
961 agctcccgtc ccagcgccca gctctgctcg cggccggcgg tccctgtcgt cggcgcgggg
1021 gggagcctcc acccgcccca gccccacctg ccccacagac acttttgata ctgaagggag
1081 gtttgcgtca acgactacct gctctgtaat tactttaaaa aaaaaacatg gaaaaagtaa
1141 aaaaatattt tttttggtca agaaaaaaaa aaaaaaaa
//