LOCUS BC056151 2359 bp mRNA linear HUM 07-AUG-2008
DEFINITION Homo sapiens galactosamine (N-acetyl)-6-sulfate sulfatase, mRNA
(cDNA clone MGC:64985 IMAGE:6026248), complete cds.
ACCESSION BC056151
VERSION BC056151.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2359)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2359)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: k Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61698137.
FEATURES Location/Qualifiers
source 1..2359
/db_xref="H-InvDB:HIT000054133"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:64985 IMAGE:6026248"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2359
/gene="GALNS"
/gene_synonym="GALNAC6S"
/gene_synonym="GAS"
/gene_synonym="MPS4A"
/db_xref="GeneID:2588"
/db_xref="HGNC:HGNC:4122"
/db_xref="MIM:253000"
CDS 71..1639
/gene="GALNS"
/gene_synonym="GALNAC6S"
/gene_synonym="GAS"
/gene_synonym="MPS4A"
/codon_start=1
/product="galactosamine (N-acetyl)-6-sulfate sulfatase"
/protein_id="AAH56151.1"
/db_xref="GeneID:2588"
/db_xref="HGNC:HGNC:4122"
/db_xref="MIM:253000"
/translation="MAAVVAATRWWQLLLVLSAAGMGASGAPQPPNILLLLMDDMGWG
DLGVYGEPSRETPNLDRMAAEGLLFPNFYSANPLCSPSRAALLTGRLPIRNGFYTTNA
HARNAYTPQEIVGGIPDSEQLLPELLKKAGYVSKIVGKWHLGHRPQFHPLKHGFDEWF
GSPNCHFGPYDNKARPNIPVYRDWEMVGRYYEEFPINLKTGEANLTQIYLQEALDFIK
RQARHHPFFLYWAVDATHAPVYASKPFLGTSQRGRYGDAVREIDDSIGKILELLQDLH
VADNTFVFFTSDNGAALISAPEQGGSNGPFLCGKQTTFEGGMREPALAWWPGHVTAGQ
VSHQLGSIMDLFTTSLALAGLTPPSDRAIDGLNLLPTLLQGRLMDRPIFYYRGDTLMA
ATLGQHKAHFWTWTNSWENFRQGIDFCPGQNVSGVTTHNLEDHTKLPLIFHLGRDPGE
RFPLSFASAEYQEALSRITSVVQQHQEALVPAQPQLNVCNWAVMNWAPPGCEKLGKCL
TPPESIPKKCLWSH"
BASE COUNT 501 a 731 c 662 g 465 t
ORIGIN
1 agccggaagg gccggcggac gctcgctagg tcggctcgct ggccggggct ccgcggctcc
61 cgtggttgcc atggcggcgg ttgtcgcggc gacgaggtgg tggcagctgt tgctggtgct
121 cagcgccgcg gggatggggg cctcgggcgc cccgcagccc cccaacatcc tgctcctgct
181 catggacgac atgggatggg gtgacctcgg ggtgtatgga gagccctcca gagagacccc
241 gaatttggac cggatggctg cagaagggct gcttttccca aacttctatt ctgccaaccc
301 tctgtgctcg ccatcgaggg cggcactgct cacaggacgg ctacccatcc gcaatggctt
361 ctacaccacc aacgcccatg ccagaaacgc ctacacaccg caggagattg tgggcggcat
421 cccagactcg gagcagctcc tgccggagct tctgaagaag gccggctacg tcagcaagat
481 tgtcggcaag tggcatctgg gtcacaggcc ccagttccac cccctgaagc acggatttga
541 tgagtggttt ggatccccca actgccactt tggaccttat gacaacaagg ccaggcccaa
601 catccctgtg tacagggact gggagatggt tggcagatat tatgaagaat ttcctattaa
661 tctgaagacg ggggaagcca acctcaccca gatctacctg caggaagccc tggacttcat
721 taagagacag gcacggcacc accccttttt cctctactgg gctgtcgacg ccacgcacgc
781 acccgtctat gcctccaaac ccttcttggg caccagtcag cgagggcggt atggagacgc
841 cgtccgggag attgatgaca gcattgggaa gatactggag ctcctccaag acctgcacgt
901 cgcggacaac accttcgtct tcttcacgtc ggacaacggc gctgccctca tttccgcccc
961 cgaacaaggt ggcagcaacg gcccctttct gtgtgggaag cagaccacgt ttgaaggagg
1021 gatgagggag cctgccctcg catggtggcc agggcacgtc actgcaggcc aggtgagcca
1081 ccagctgggc agcatcatgg acctcttcac caccagcctg gcccttgcgg gcctgacgcc
1141 gcccagcgac agggccattg atggcctcaa cctcctcccc accctcctgc agggccggct
1201 gatggacagg cctatcttct attaccgtgg cgacacgctg atggcggcca ccctcgggca
1261 gcacaaggct cacttctgga cctggaccaa ctcctgggag aacttcagac agggcattga
1321 tttctgccct gggcagaacg tttcaggggt cacaactcac aatctggaag accacacgaa
1381 gctgcccctg atcttccacc tgggacggga cccaggggag aggttccccc tcagctttgc
1441 cagcgccgag taccaggagg ccctcagcag gatcacctcg gtcgtccagc agcaccagga
1501 ggccttggtc cccgcgcagc cccagctcaa cgtgtgcaac tgggcggtca tgaactgggc
1561 acctccgggc tgtgaaaagt tagggaagtg tctgacacct ccagaatcca ttcccaagaa
1621 gtgcctctgg tcccactagc acctgcgcag actcaggcca ggcctagaat ctccggttgg
1681 ccctgcaagt gcctggagga aggatggctc tggcctcggt cctcccccaa ccctgcccaa
1741 gccagacaga cagcacctgc agacgcaggg ggactgcaca attccacctg cccaggacct
1801 gaccctggcg tgtgcttggc cctcctcctc gcccacggcg cctcagattt caggaccctc
1861 ctcctcgccc acggcgcctc agacctcagg accctgccgt ctcacgcctt tgtgaacccc
1921 aaatatctga gaccagtctc agtttatttt gccaagggta aggatgcacc tgtgacagcc
1981 tcaggaggtc ctgacaacag gtgcctgagg tggctgggga tacagtttgc ctttatacat
2041 cttagggaga cacaagatca gtatgtgtat ggcgtacatt ggttcagtca gccttccact
2101 gaatacacga ttgagtctgg cccagtgaat ccgcattttt atgtaaacag taagggaacg
2161 gggcaatcat ataagcgttt gtctcagggg agccccagag ggatgacttc cagttccgtc
2221 tgtcctttgt ctacaaggaa tttccctgga cgctaattat gagggaggcg tgtagcttct
2281 tatcattgta actatgttat ttagaaataa aacgggaggc aggtttgcct aattcccagc
2341 ttgaaaaaaa aaaaaaaaa
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